RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 HOXC11O43248 304 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-209ENST00000627620 UBBP0CG47 229 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 UBCP0CG48 685 aaKnown RBP11.83□□□□□ -0.52
SCN8A-209ENST00000627620 PEA15Q15121 130 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 NHSL2Q5HYW2 709 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 TMEM207Q6UWW9 146 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 ZNF813Q6ZN06 617 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 CMIPQ8IY22 773 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 ZNF511Q8NB15 262 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 OR4N2Q8NGD1 307 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 SLC37A2Q8TED4 501 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 ASB16Q96NS5 453 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 SLC38A1Q9H2H9 487 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 GNG12Q9UBI6 72 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 STEAP1Q9UHE8 339 aa11.83□□□□□ -0.52
SCN8A-209ENST00000627620 CSO75390 466 aaKnown RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 MTNR1BP49286 362 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 SLX4IPQ5VYV7 408 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 AFMIDQ63HM1 303 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 PTRH1Q86Y79 214 aaKnown RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 FUNDC1Q8IVP5 155 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 TMEM178AQ8NBL3 297 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 CENPOQ9BU64 300 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 SGPP1Q9BX95 441 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 GALNT9Q9HCQ5 603 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 SLC23A2Q9UGH3 650 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 KCND3Q9UK17 655 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 KLK4Q9Y5K2 254 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 SNX11Q9Y5W9 270 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 OR5K3A6NET4 321 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ZNF814B7Z6K7 855 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 CD14P08571 375 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 GPX2P18283 190 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ADPRHP54922 357 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 F2RL1P55085 397 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 MEP1BQ16820 701 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 HAS2Q92819 552 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ELSPBP1Q96BH3 223 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 NKX3-1Q99801 234 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 NRSN2Q9GZP1 204 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 LRIT2A6NDA9 550 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 TNFRSF10CO14798 259 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 PRAMEF4O60810 478 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 TRHRP34981 398 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 CCL11P51671 97 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 NKX6-1P78426 367 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 PDLIM3Q53GG5 364 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 C19orf12Q9NSK7 152 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 NDUFAF4Q9P032 175 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ANKRD12Q6UB98 2062 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 PRAMEF25A6NGN4 478 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 KITLGP21583 273 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 TRIM23P36406 574 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 RAP2BP61225 183 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 GPLD1P80108 840 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ALKBH1Q13686 389 aaKnown RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 PLPP6Q8IY26 295 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 LINC01465Q8N7H1 131 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 MZB1Q8WU39 189 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ISL2Q96A47 359 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 RASD2Q96D21 266 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ZNF419Q96HQ0 510 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 TEX37Q96LM6 180 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 TUBB1Q9H4B7 451 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 METTL17Q9H7H0 456 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 KLRC4-KLRK1H3BQV0 150 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 GMDSO60547 372 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 FBXO24O75426 580 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 CD1CP29017 333 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 Q6ZTK2 550 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 OR5M11Q96RB7 305 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 CDCP1Q9H5V8 836 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 C6orf106Q9H6K1 298 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-209ENST00000627620 FKRPQ9H9S5 495 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 LYRM4Q9HD34 91 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 ATP13A2Q9NQ11 1180 aa11.82□□□□□ -0.52
SCN8A-209ENST00000627620 IGHV3-20A0A0C4DH32 117 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 SLC5A10A0PJK1 596 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 ACOT8O14734 319 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 MC2RQ01718 297 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 NRARPQ7Z6K4 114 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 SECTM1Q8WVN6 248 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 RGPD5Q99666 1765 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 MSTNO14793 375 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 CHRNB1P11230 501 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 PSMB1P20618 241 aaKnown RBP11.81□□□□□ -0.52
SCN8A-209ENST00000627620 EIF2DP41214 584 aaKnown RBP11.81□□□□□ -0.52
SCN8A-209ENST00000627620 CYB561P49447 251 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 MFGE8Q08431 387 aaPredicted RBP11.81□□□□□ -0.52
SCN8A-209ENST00000627620 C1orf140Q5VVS0 124 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 SLC22A24Q8N4F4 322 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 NIPAL2Q9H841 368 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 LUZP4Q9P127 313 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 NUMA1Q14980 2115 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 K7EPK0 472 aa11.81□□□□□ -0.52
SCN8A-209ENST00000627620 RPS27AP62979 156 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms