RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ZNF35P13682 527 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 B4GALT1P15291 398 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 CDKN2CP42773 168 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 CLNS1AP54105 237 aaKnown RBP12.57□□□□□ -0.4
PNKP-218ENST00000625299 SMU1Q2TAY7 513 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 DCAF12L2Q5VW00 463 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 ZNF813Q6ZN06 617 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 ZNF771Q7L3S4 317 aaPredicted RBP12.57□□□□□ -0.4
PNKP-218ENST00000625299 SERPINA11Q86U17 422 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 LRRC34Q8IZ02 419 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 CLIP4Q8N3C7 705 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 ZNF417Q8TAU3 575 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 NANPQ8TBE9 248 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 RAB39BQ96DA2 213 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 KTI12Q96EK9 354 aaPredicted RBP12.57□□□□□ -0.4
PNKP-218ENST00000625299 CCDC115Q96NT0 180 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 ZNF587Q96SQ5 575 aaPredicted RBP12.57□□□□□ -0.4
PNKP-218ENST00000625299 CACYBPQ9HB71 228 aaKnown RBP12.57□□□□□ -0.4
PNKP-218ENST00000625299 B3GNT2Q9NY97 397 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 P2RX2Q9UBL9 471 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 ZNF346Q9UL40 294 aaKnown RBP12.57□□□□□ -0.4
PNKP-218ENST00000625299 AIM2O14862 343 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 BCHEP06276 602 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 NUDT17P0C025 328 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 ZNF14P17017 642 aaPredicted RBP12.56□□□□□ -0.4
PNKP-218ENST00000625299 LSP1P33241 339 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 GIPRP48546 466 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 AQP5P55064 265 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 CCL8P80075 99 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 MRPS11P82912 194 aaKnown RBP12.56□□□□□ -0.4
PNKP-218ENST00000625299 HOXC5Q00444 222 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 ZP4Q12836 540 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 DPY19L1Q2PZI1 675 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 MIDNQ504T8 468 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 RPS26P11Q5JNZ5 115 aaPredicted RBP12.56□□□□□ -0.4
PNKP-218ENST00000625299 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 TMEM123Q8N131 208 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 ZNF781Q8N8C0 355 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 EMC6Q9BV81 110 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 OR51B6Q9H340 312 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 ZNF385DQ9H6B1 395 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 BTNL2Q9UIR0 455 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 POFUT2Q9Y2G5 429 aa12.56□□□□□ -0.4
PNKP-218ENST00000625299 ITM2AO43736 263 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 PRSS23O95084 383 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 BPGMP07738 259 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 HKR1P10072 659 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 ARAFP10398 606 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 NQO1P15559 274 aaKnown RBP12.55□□□□□ -0.4
PNKP-218ENST00000625299 GRPRP30550 384 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 RAD52P43351 418 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 TXNL4AP83876 142 aaKnown RBP12.55□□□□□ -0.4
PNKP-218ENST00000625299 EGR4Q05215 589 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
PNKP-218ENST00000625299 MAPK11Q15759 364 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 FXNQ16595 210 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 RNF220Q5VTB9 566 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 RBMS3Q6XE24 437 aaKnown RBP12.55□□□□□ -0.4
PNKP-218ENST00000625299 UEVLDQ8IX04 471 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 RNF217Q8TC41 542 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 TEX37Q96LM6 180 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 B3GAT2Q9NPZ5 323 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 TAAR3PQ9P1P4 343 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 RPS6KB2Q9UBS0 482 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
PNKP-218ENST00000625299 ARHGAP32A7KAX9 2087 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 WDR91A4D1P6 747 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 J3QLI3 93 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 TPD52L2O43399 206 aaKnown RBP12.54□□□□□ -0.4
PNKP-218ENST00000625299 TRAF3IP2O43734 574 aaPredicted RBP12.54□□□□□ -0.4
PNKP-218ENST00000625299 CLPTM1O96005 669 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 FAM157BP0CG42 384 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 ETFAP13804 333 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 FPR2P25090 351 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 CRATP43155 626 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 CRISP3P54108 245 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 UFM1P61960 85 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 RAB1AP62820 205 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 RAB39AQ14964 217 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 MFSD13AQ14CX5 517 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 RGS7BPQ6MZT1 257 aaPredicted RBP12.54□□□□□ -0.4
PNKP-218ENST00000625299 TMEM154Q6P9G4 183 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 SNX33Q8WV41 574 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 TAAR8Q969N4 342 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 PKNOX2Q96KN3 472 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 ZNF75AQ96N20 296 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 ZIM3Q96PE6 472 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 TSPAN32Q96QS1 320 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 OR52E6Q96RD3 313 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 ULBP2Q9BZM5 246 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 ARMC7Q9H6L4 198 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 NTN4Q9HB63 628 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 DSPPQ9NZW4 1301 aa12.54□□□□□ -0.4
PNKP-218ENST00000625299 C17orf100A8MU93 164 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms