RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 H7C417 338 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 VIMP08670 466 aaKnown RBP13.92□□□□□ -0.18
DDB2-216ENST00000622878 NQO1P15559 274 aaKnown RBP13.92□□□□□ -0.18
DDB2-216ENST00000622878 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
DDB2-216ENST00000622878 TUBA1BP68363 451 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 TUBA4AP68366 448 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 PUDPQ08623 228 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.184e-9■■■□□ 16.6
DDB2-216ENST00000622878 PMS2P3Q13401 168 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 VEZF1Q14119 521 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 MST1LQ2TV78 715 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 CEACAM16Q2WEN9 425 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 TUBA1AQ71U36 451 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 PXKQ7Z7A4 578 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 UEVLDQ8IX04 471 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 C20orf196Q8IYI0 205 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 GPR137CQ8N3F9 429 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 VANGL1Q8TAA9 524 aaPredicted RBP13.92□□□□□ -0.18
DDB2-216ENST00000622878 RASSF5Q8WWW0 418 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 TXNDC15Q96J42 360 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 LRR1Q96L50 414 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 PRSS27Q9BQR3 290 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 EMC6Q9BV81 110 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 KATNB1Q9BVA0 655 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 ASPNQ9BXN1 380 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 REG4Q9BYZ8 158 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 USP22Q9UPT9 525 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 NOX1Q9Y5S8 564 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 SVEP1Q4LDE5 3571 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 LOC100653049A0A140TA62 436 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 SLC35F4A4IF30 521 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 TRAPPC13A5PLN9 417 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 MRASO14807 208 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 AKAP8O43823 692 aaKnown RBP13.91□□□□□ -0.18
DDB2-216ENST00000622878 KRT34O76011 436 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 CECR9P0C854 216 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
DDB2-216ENST00000622878 POU3F1Q03052 451 aaPredicted RBP13.91□□□□□ -0.18
DDB2-216ENST00000622878 ZNF74Q16587 644 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 SWI5Q1ZZU3 235 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 ZNF627Q7L945 461 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 SNX32Q86XE0 403 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 OR5J2Q8NH18 312 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 HS6ST2Q96MM7 605 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 ECSITQ9BQ95 431 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 SEC61A2Q9H9S3 476 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 MED29Q9NX70 200 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 SLC7A7Q9UM01 511 aa13.91□□□□□ -0.18
DDB2-216ENST00000622878 CUBNO60494 3623 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 ZNF99A8MXY4 864 aaPredicted RBP13.9□□□□□ -0.18
DDB2-216ENST00000622878 M0R3G1 203 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 SSX4O60224 188 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 CBR1P16152 277 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 CALCRP30988 508 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 IL1RL1Q01638 556 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 NAAAQ02083 359 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 ZP4Q12836 540 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 MYPOPQ86VE0 399 aaPredicted RBP13.9□□□□□ -0.18
DDB2-216ENST00000622878 C10orf53Q8N6V4 93 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 MAPK1IP1LQ8NDC0 245 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 OR10H5Q8NGA6 315 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 SLC26A7Q8TE54 656 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 C10orf82Q8WW14 230 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 MPP4Q96JB8 637 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 ADAD1Q96M93 576 aaKnown RBP13.9□□□□□ -0.18
DDB2-216ENST00000622878 SLC19A3Q9BZV2 496 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 MOV10Q9HCE1 1003 aaKnown RBP13.9□□□□□ -0.18
DDB2-216ENST00000622878 TAS2R5Q9NYW4 299 aa13.9□□□□□ -0.18
DDB2-216ENST00000622878 A0A096LNT2 108 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 SLC22A2O15244 555 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 CELA3BP08861 270 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 TNFRSF1BP20333 461 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 CARD17Q5XLA6 110 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 ERICH5Q6P6B1 374 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 TTC33Q6PID6 262 aaPredicted RBP13.89□□□□□ -0.19
DDB2-216ENST00000622878 CARM1Q86X55 608 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 LRRC17Q8N6Y2 441 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 MEPEQ9NQ76 525 aaPredicted RBP13.89□□□□□ -0.19
DDB2-216ENST00000622878 CA10Q9NS85 328 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 B3GNT2Q9NY97 397 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 SH3GLB1Q9Y371 365 aa13.89□□□□□ -0.19
DDB2-216ENST00000622878 YLPM1P49750 1951 aaKnown RBP13.89□□□□□ -0.19
DDB2-216ENST00000622878 IGHV4-30-2A0A087WSY4 118 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 CH25HO95992 272 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 CRYAAP02489 173 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 ASAH2BP0C7U1 165 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 ADORA3P0DMS8 318 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 AHCYP23526 432 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
DDB2-216ENST00000622878 HGFACQ04756 655 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 CHRNB3Q05901 458 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 CAMK2DQ13557 499 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 RAB35Q15286 201 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 SLC46A3Q7Z3Q1 461 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 CCDC36Q8IYA8 594 aa13.88□□□□□ -0.19
DDB2-216ENST00000622878 PCYOX1LQ8NBM8 494 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms