RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NDUFS1P28331 727 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 MC4RP32245 332 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SOAT1P35610 550 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CD200P41217 278 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 RBM34P42696 430 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 ZNF84P51523 738 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 IRF8Q02556 426 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 HGFACQ04756 655 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TMEM115Q12893 351 aaPredicted RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 TMEM69Q5SWH9 247 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 UBXN11Q5T124 520 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 KHDRBS2Q5VWX1 349 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 WSCD1Q658N2 575 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SYT9Q86SS6 491 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TMPRSS11BQ86T26 416 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 IQCHQ86VS3 1027 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 C1QL4Q86Z23 238 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 BAP18Q8IXM2 172 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ARL14Q8N4G2 192 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TRAM1L1Q8N609 369 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ACBD7Q8N6N7 88 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 C19orf47Q8N9M1 422 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 STEAP2Q8NFT2 490 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OR51G2Q8NGK0 314 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OR2A12Q8NGT7 310 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ZNF461Q8TAF7 563 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SLC7A13Q8TCU3 470 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CCDC107Q8WV48 283 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 NUDCD2Q8WVJ2 157 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TFGQ92734 400 aaPredicted RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 S100A16Q96FQ6 103 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 TRMT61BQ9BVS5 477 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 SMG9Q9H0W8 520 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 P2RY12Q9H244 342 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OSER1Q9NX31 292 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CALML5Q9NZT1 146 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CACFD1Q9UGQ2 172 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 IL17BQ9UHF5 180 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 LOC285556D6RIA3 1793 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ALPK3Q96L96 1907 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 KIAA0100Q14667 2235 aaKnown RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 ANK1P16157 1881 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TMEM272A0A1B0GTI8 110 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 SMCO3A2RU48 225 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR5H15A6NDH6 313 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR5H1A6NKK0 313 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR52A4PA6NMU1 304 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 M0R143 59 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 MAGEB4O15481 346 aaPredicted RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 HYAL3O43820 417 aaPredicted RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 EPCAMP16422 314 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 MMP11P24347 488 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 NSG1P42857 185 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 UBE2G2P60604 165 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 STXBP1P61764 594 aaKnown RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 NKX6-1P78426 367 aaPredicted RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 SLBPQ14493 270 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS11-209ENST00000622309 IHHQ14623 411 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 RPE65Q16518 533 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 DMRTA1Q5VZB9 504 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 PODNL1Q6PEZ8 512 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 SLC24A5Q71RS6 500 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR4K5Q8NGD3 323 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 KIRREL1Q96J84 757 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 IP6K3Q96PC2 410 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 ADAM2Q99965 735 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 FNDC11Q9BVV2 318 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 SF3B5Q9BWJ5 86 aaKnown RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 ATG5Q9H1Y0 275 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR51I1Q9H343 314 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TMEM38AQ9H6F2 299 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 EGLN3Q9H6Z9 239 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 ZFYVE1Q9HBF4 777 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 AK6Q9Y3D8 172 aaKnown RBP7.27□□□□□ -1.25
VPS11-209ENST00000622309 LRRC37A2A6NM11 1700 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 DAPL1A0PJW8 107 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 IDSB3KWA1 339 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 SLC25A4P12235 298 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 ACP5P13686 325 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 COL9A1P20849 921 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 GSTM3P21266 225 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 ACVR1BP36896 505 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 KIR3DL2P43630 455 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 PTH2RP49190 550 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 CBFBQ13951 182 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 ARHGAP19Q14CB8 494 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 C9orf57Q5W0N0 161 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TCTN3Q6NUS6 607 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 DHRS11Q6UWP2 260 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 VITQ6UXI7 678 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 LANCL3Q6ZV70 420 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TTLL10Q6ZVT0 673 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 NDUFAF7Q7L592 441 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 LINC01465Q8N7H1 131 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR5AP2Q8NGF4 316 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 OR5AK3PQ8NH89 298 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TERB2Q8NHR7 220 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 NPRL2Q8WTW4 380 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 SLC25A36Q96CQ1 311 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 HMCESQ96FZ2 354 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms