RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TFPI2P48307 235 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 CDH6P55285 790 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 GNB2P62879 340 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ACVR1Q04771 509 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 PDIA2Q13087 525 aaKnown RBP3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ARHGAP19Q14CB8 494 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 CTRB2Q6GPI1 263 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 NIPA1Q7RTP0 329 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ZNF557Q8N988 423 aaPredicted RBP3.42□□□□□ -1.86
CPNE3-213ENST00000622183 C20orf203Q8NBC4 194 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 VN1R2Q8NFZ6 395 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 OR7G2Q8NG99 324 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 FANK1Q8TC84 345 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 FAM151AQ8WW52 585 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ELMO1Q92556 727 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 PHYHIPLQ96FC7 376 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 KCTD14Q9BQ13 255 aaPredicted RBP3.42□□□□□ -1.86
CPNE3-213ENST00000622183 NRIP2Q9BQI9 281 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 TMEM59Q9BXS4 323 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ROGDIQ9GZN7 287 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 DEFB127Q9H1M4 99 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 SRMSQ9H3Y6 488 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 SIAEQ9HAT2 523 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 NEK6Q9HC98 313 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 CLCF1Q9UBD9 225 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 MTRF1LQ9UGC7 380 aaKnown RBP3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ARHGAP23Q9P227 1491 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 THSD7BQ9C0I4 1608 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 A0A0G2JLM5 398 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 USP27XA6NNY8 438 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 DNALI1O14645 258 aaPredicted RBP3.41□□□□□ -1.86
CPNE3-213ENST00000622183 MGRN1O60291 552 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 NPIPB7O75200 414 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 ACTL6AO96019 429 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 IGLV1-47P01700 117 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 KRT6AP02538 564 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 CD1EP15812 388 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 CCNCP24863 283 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 TNNT2P45379 298 aaPredicted RBP3.41□□□□□ -1.86
CPNE3-213ENST00000622183 PRRX1P54821 245 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 NUP107P57740 925 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 MRPS22P82650 360 aaKnown RBP3.41□□□□□ -1.86
CPNE3-213ENST00000622183 GBE1Q04446 702 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 SPANXN2Q5MJ10 180 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 SLC8B1Q6J4K2 584 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 RALGPS2Q86X27 583 aaPredicted RBP3.41□□□□□ -1.86
CPNE3-213ENST00000622183 PUSL1Q8N0Z8 303 aaKnown RBP3.41□□□□□ -1.86
CPNE3-213ENST00000622183 OR4C5Q8NGB2 326 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 PIBF1Q8WXW3 757 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 CHP1Q99653 195 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 OR11A1Q9GZK7 315 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 SLC25A15Q9Y619 301 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 LRRK1Q38SD2 2015 aa3.41□□□□□ -1.86
CPNE3-213ENST00000622183 AGRNO00468 2067 aa3.4□□□□□ -1.86
CPNE3-213ENST00000622183 KIR2DL5BA0A0G2JN68 375 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 KIR2DL5BA0A0G2JPC4 375 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 SMCO3A2RU48 225 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 KLLNB2CW77 178 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 DYNC1I1O14576 645 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF19P17023 458 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 GALP22466 123 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 OTX1P32242 354 aaPredicted RBP3.4□□□□□ -1.87
CPNE3-213ENST00000622183 BTCP35070 178 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 UGT2B15P54855 530 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 GPX6P59796 221 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF630Q2M218 657 aaPredicted RBP3.4□□□□□ -1.87
CPNE3-213ENST00000622183 PAGE3Q5JUK9 113 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 SASS6Q6UVJ0 657 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 LHFPL3Q86UP9 236 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 MFSD6LQ8IWD5 586 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 KIR2DL5AQ8N109 375 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 MS4A15Q8N5U1 240 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 OR2G2Q8NGZ5 317 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 KIR2DL5BQ8NHK3 375 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 SLC38A4Q969I6 547 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 SLC35E1Q96K37 410 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 TSNARE1Q96NA8 513 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 HES7Q9BYE0 225 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 CCL28Q9NRJ3 127 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 XCL2Q9UBD3 114 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
CPNE3-213ENST00000622183 TMED5Q9Y3A6 229 aa3.4□□□□□ -1.87
CPNE3-213ENST00000622183 ERVV-1B6SEH8 477 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 FAM189A1O60320 539 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 DFNA5O60443 496 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 KLHL41O60662 606 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 FTH1P02794 183 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 RORAP35398 523 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 GPR6P46095 362 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 SUB1P53999 127 aaKnown RBP eCLIP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 DAZ2Q13117 558 aaKnown RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 KIAA0087Q14695 138 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 Q6ZSR3 168 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 ASCL5Q7RTU5 278 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 TMEM135Q86UB9 458 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 TMEM61Q8N0U2 210 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 SLC22A8Q8TCC7 542 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 ACMSDQ8TDX5 336 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms