RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 STEAP1BQ6NZ63 245 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 RPUSD3Q6P087 351 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 LCTLQ6UWM7 567 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF813Q6ZN06 617 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GABRG1Q8N1C3 465 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MFSD9Q8NBP5 474 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 OR56B2PQ8NGI1 322 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GPR119Q8TDV5 335 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 TLR9Q9NR96 1032 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 RAB22AQ9UL26 194 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ARGFXA6NJG6 315 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SNRPGP62308 76 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 HFEQ30201 348 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM41BQ5BJD5 291 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 LIPNQ5VXI9 398 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 B3GNTL1Q67FW5 361 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 KDF1Q8NAX2 398 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ASB16Q96NS5 453 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 AMD1P17707 334 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RFLNAQ6ZTI6 216 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TMEFF1Q8IYR6 380 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF511Q8NB15 262 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 FZD8Q9H461 694 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 NCDNQ9UBB6 729 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 DLC1Q96QB1 1528 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MSCO60682 206 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 IFNA1P01562 189 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MMP9P14780 707 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MPGP29372 298 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 GPR33Q49SQ1 333 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 SLC18B1Q6NT16 456 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 KIAA1324Q6UXG2 1013 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 Q6ZN92 141 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 C11orf42Q8N5U0 333 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PHYHIPLQ96FC7 376 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TAPBPLQ9BX59 468 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TPSD1Q9BZJ3 242 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 FKRPQ9H9S5 495 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CALCRP30988 508 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RBP2P50120 134 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 SIM1P81133 766 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CCINQ13939 588 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 LINC00303Q3SY05 128 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 LCN15Q6UWW0 184 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 C15orf39Q6ZRI6 1047 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PTRH1Q86Y79 214 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 HSD17B8Q92506 261 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 KIRREL1Q96J84 757 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 HIPK2Q9H2X6 1198 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 EHFQ9NZC4 300 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CCL15-CCL14A0A0B4J2E2 113 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CNMDO75829 334 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MTNR1BP49286 362 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CCL15Q16663 113 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 WDR74Q6RFH5 385 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ARRDC2Q8TBH0 407 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CWH43Q9H720 699 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ELF5Q9UKW6 265 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 HSPB6O14558 160 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PRAMEF11O60813 436 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 C1QCP02747 245 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 DPEP1P16444 411 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RPS16P62249 146 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MAP2K5Q13163 448 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 C12orf40Q86WS4 652 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 SULF2Q8IWU5 870 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 GLYATL1Q969I3 302 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 NTAN1Q96AB6 310 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PAM16Q9Y3D7 125 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 C17orf113A0A1B0GUU1 675 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PIRO00625 290 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PTP4A3O75365 173 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM225BP0DP42 221 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OR8U1Q8NH10 309 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MAFBQ9Y5Q3 323 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OR2W5A6NFC9 320 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 HSD17B6O14756 317 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 DCAF12L2Q5VW00 463 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OR4A47Q6IF82 309 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 SPATA31D1Q6ZQQ2 1576 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OR2D3Q8NGH3 330 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PTP4A1Q93096 173 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RPUSD4Q96CM3 377 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RTP4Q96DX8 246 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OR7D2Q96RA2 312 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 HINT2Q9BX68 163 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 SEMA6CQ9H3T2 930 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 NFAT5O94916 1531 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 COL1A1P02452 1464 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 KDM4FA0A1W2PPD8 638 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 DDTP30046 118 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MC3RP41968 323 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TOMM34Q15785 309 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF628Q5EBL2 1059 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ARL14EPQ8N8R7 260 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MDGA1Q8NFP4 955 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CMTM3Q96MX0 182 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 NPY6RQ99463 290 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms