RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GPR3P46089 330 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 PCBP3P57721 371 aaKnown RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 MC1RQ01726 317 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 TGIF1Q15583 401 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 TMEM35AQ53FP2 167 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 MESTQ5EB52 335 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 C11orf87Q6NUJ2 197 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 FIGNL1Q6PIW4 674 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 CXXC5Q7LFL8 322 aaKnown RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 CBARPQ8N350 705 aaPredicted RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 SLC30A7Q8NEW0 376 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 NUDCD2Q8WVJ2 157 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 TNFAIP8L1Q8WVP5 186 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 FCAMRQ8WWV6 532 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 ECHDC3Q96DC8 303 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 SERINC2Q96SA4 455 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 BHLHE41Q9C0J9 482 aaPredicted RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 MED17Q9NVC6 651 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 CALML5Q9NZT1 146 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 CLEC4EQ9ULY5 219 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 FAM96BQ9Y3D0 163 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 FAM157AC9JC47 383 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 F8VVB4 439 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 F8VWA3 439 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 UCHL1P09936 223 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 MPC1LP0DKB6 136 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 GSK3AP49840 483 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 RPS13P62277 151 aaKnown RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 NAAAQ02083 359 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 LY6G6FQ5SQ64 297 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 CDC73Q6P1J9 531 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 APCDD1Q8J025 514 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 SLC39A11Q8N1S5 342 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 CLP1Q92989 425 aaKnown RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 TMEM169Q96HH4 297 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 RIOK2Q9BVS4 552 aaKnown RBP9.51□□□□□ -0.89
VPS11-207ENST00000620429 FKRPQ9H9S5 495 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 TDP1Q9NUW8 608 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 DOK5Q9P104 306 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 MOKQ9UQ07 419 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 C7orf77A4D0Y5 90 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 OR5H14A6NHG9 310 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 OR2AT4A6NND4 320 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 F5H0A9 414 aaPredicted RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 H0YIV9 168 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 BNIP3LO60238 219 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 MTX2O75431 263 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 SFTPBP07988 381 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 ARAFP10398 606 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 HSD3B2P26439 372 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 CASRP41180 1078 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 OMPP47874 163 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 SLC6A11P48066 632 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 VWA2Q5GFL6 755 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 FAM27D1Q5T7N8 215 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 HIST2H3PS2Q5TEC6 136 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 GRHL2Q6ISB3 625 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 PEG10Q86TG7 708 aaKnown RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 HS6ST3Q8IZP7 471 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 BEST3Q8N1M1 668 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 WFIKKN2Q8TEU8 576 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 OVCA2Q8WZ82 227 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 EDAQ92838 391 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 RFKQ969G6 155 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 HSPA12BQ96MM6 686 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 OR51B6Q9H340 312 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 BRF2Q9HAW0 419 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 CDH23Q9H251 3354 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 ZNF726A6NNF4 738 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 ITGB1BP1O14713 200 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 SLC16A5O15375 505 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 LRG1P02750 347 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 H1F0P07305 194 aaKnown RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 SPARCP09486 303 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 FAM157CP0CG43 387 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 OPRD1P41143 372 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 UBE2MP61081 183 aaKnown RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 ZNF763Q0D2J5 394 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 MAJINQ3KP22 176 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 RPS26P11Q5JNZ5 115 aaPredicted RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 DCAF10Q5QP82 559 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 NDUFAF7Q7L592 441 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 IZUMO1Q8IYV9 350 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 CMTM4Q8IZR5 234 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 OR5AP2Q8NGF4 316 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 PPCDCQ96CD2 204 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 SMG9Q9H0W8 520 aaKnown RBP9.5□□□□□ -0.89
VPS11-207ENST00000620429 OR51V1Q9H2C8 321 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 TAS2R10Q9NYW0 307 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 GULP1Q9UBP9 304 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 KLK11Q9UBX7 282 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 SLC27A6Q9Y2P4 619 aa9.5□□□□□ -0.89
VPS11-207ENST00000620429 POMT1Q9Y6A1 747 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms