RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 BNIP2Q12982 314 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 EXOC3L2Q2M3D2 409 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 ZNF311Q5JNZ3 666 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 GCNT6Q5T4J0 391 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 PRAMEF8Q5VWM4 474 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 PRAMEF7Q5VXH5 474 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 NET1Q7Z628 596 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-228ENST00000619157 TMEM200AQ86VY9 491 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 CDC20BQ86Y33 519 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 KIF18BQ86Y91 864 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 PEX5LQ8IYB4 626 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 GABRG1Q8N1C3 465 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 GPR32P1Q8NGA4 272 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 OR4D11Q8NGI4 311 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 BBS10Q8TAM1 723 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 TMEM234Q8WY98 164 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 ANKRD27Q96NW4 1050 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 DACH2Q96NX9 599 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 CGREF1Q99674 301 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 SIKE1Q9BRV8 207 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 TMEM38AQ9H6F2 299 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 KAT8Q9H7Z6 458 aaKnown RBP6.58□□□□□ -1.36
CBWD1-228ENST00000619157 PLEKHF2Q9H8W4 249 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-228ENST00000619157 PRSS50Q9UI38 385 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 LEF1Q9UJU2 399 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-228ENST00000619157 NDUFAF1Q9Y375 327 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 TMED7Q9Y3B3 224 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 NOX1Q9Y5S8 564 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 FREM1Q5H8C1 2179 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 NF1P21359 2839 aa6.58□□□□□ -1.36
CBWD1-228ENST00000619157 IGKV1D-42A0A075B6H8 117 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 IGKV3D-15A0A087WSY6 115 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 GJE1A6NN92 205 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 SULT2B1O00204 365 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 ZNF208O43345 1280 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PRKD3O94806 890 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 MFN2O95140 757 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PMS2P2O95744 297 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PLGP00747 810 aaPredicted RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 OPN1SWP03999 348 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 THY1P04216 161 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 YES1P07947 543 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 ETS2P15036 469 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 AQP1P29972 269 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PRKAR1BP31321 381 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PEX19P40855 299 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 POLR2HP52434 150 aaKnown RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 FOXG1P55316 489 aaPredicted RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 CTBP2P56545 445 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 RASGEF1BQ0VAM2 473 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 SCARB2Q14108 478 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 RNPS1Q15287 305 aaKnown RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 NPTX1Q15818 432 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PDSS1Q5T2R2 415 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 EEF1A1P5Q5VTE0 462 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 METTL21CQ5VZV1 264 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 NANOGP8Q6NSW7 305 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 DHRS4L2Q6PKH6 230 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 C1QL2Q7Z5L3 287 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 CALHM3Q86XJ0 350 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 RBM45Q8IUH3 476 aaKnown RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 TSPEARQ8WU66 669 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 PTDSS2Q9BVG9 487 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 POLDIP3Q9BY77 421 aaKnown RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 KLHL4Q9C0H6 718 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 RABEP2Q9H5N1 569 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 NANOGQ9H9S0 305 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 MED4Q9NPJ6 270 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 GLRX2Q9NS18 164 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 THUMPD1Q9NXG2 353 aaKnown RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 ELOVL5Q9NYP7 299 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 CALML5Q9NZT1 146 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 C6orf203Q9P0P8 240 aaPredicted RBP6.57□□□□□ -1.36
CBWD1-228ENST00000619157 ARMCX1Q9P291 453 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 SEC14L4Q9UDX3 406 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 HDGFL3Q9Y3E1 203 aa6.57□□□□□ -1.36
CBWD1-228ENST00000619157 ROS1P08922 2347 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 ANK3Q12955 4377 aaKnown RBP6.56□□□□□ -1.36
CBWD1-228ENST00000619157 LIPT2A6NK58 231 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 ZNF724A8MTY0 619 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 FTCDNL1E5RQL4 147 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 C16orf97H3BN30 126 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 ANGPT2O15123 496 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 ATP8B1O43520 1251 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 LYPD3O95274 346 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 VIMP08670 466 aaKnown RBP6.56□□□□□ -1.36
CBWD1-228ENST00000619157 TROVE2P10155 538 aaKnown RBP eCLIP6.56□□□□□ -1.36
CBWD1-228ENST00000619157 TFPIP10646 304 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 PSMB1P20618 241 aaKnown RBP6.56□□□□□ -1.36
CBWD1-228ENST00000619157 FPR1P21462 350 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 CRYGSP22914 178 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 PPIBP23284 216 aaKnown RBP6.56□□□□□ -1.36
CBWD1-228ENST00000619157 HTR3AP46098 478 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 OR3A2P47893 321 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 CLK1P49759 484 aaKnown RBP6.56□□□□□ -1.36
CBWD1-228ENST00000619157 SLC16A1P53985 500 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 IST1P53990 364 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 GYS2P54840 703 aa6.56□□□□□ -1.36
CBWD1-228ENST00000619157 OR2B6P58173 313 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms