RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 RNF122Q9H9V4 155 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 BCL2L10Q9HD36 194 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 VNN3Q9NY84 501 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 CLCF1Q9UBD9 225 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 RPS6KA6Q9UK32 745 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 MOKQ9UQ07 419 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 DSPPQ9NZW4 1301 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 EXPH5Q8NEV8 1989 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 A0A087WUJ7 227 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 TEX13CA0A0J9YWL9 993 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 TVP23AA6NH52 213 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 HSPB2A8KAH6 182 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 EFCAB9A8MZ26 197 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 C16orf97H3BN30 126 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 CPN1P15169 458 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 CDKN1AP38936 164 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 GIPRP48546 466 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 PTDSS1P48651 473 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 EEFSECP57772 596 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 CLRN1P58418 232 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 GMFBP60983 142 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SLC35A1P78382 337 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 GALK2Q01415 458 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 HSPB2Q16082 182 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 FAM98BQ52LJ0 330 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 ALG10Q5BKT4 473 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 ANKRD16Q6P6B7 361 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 STAC2Q6ZMT1 411 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 ZNF813Q6ZN06 617 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SLC35D2Q76EJ3 337 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 BCDIN3DQ7Z5W3 292 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 CALHM3Q86XJ0 350 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 AQP11Q8NBQ7 271 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 LRTOMTQ8WZ04 291 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 WNT2BQ93097 391 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SGTBQ96EQ0 304 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 PLPPR2Q96GM1 343 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SAMD8Q96LT4 415 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 MYCBPQ99417 103 aaPredicted RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SYT4Q9H2B2 425 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SMURF2Q9HAU4 748 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 EMC7Q9NPA0 242 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 DCAF13Q9NV06 445 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 QPCTLQ9NXS2 382 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 PDP1Q9P0J1 537 aaPredicted RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 TESQ9UGI8 421 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 NDRG3Q9UGV2 375 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 DUSP13Q9UII6 198 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 A4GNTQ9UNA3 340 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 GTF2A1LQ9UNN4 478 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
SYCP1-210ENST00000618516 ZNF835Q9Y2P0 537 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 IER3IP1Q9Y5U9 82 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 FLVCR1Q9Y5Y0 555 aa4.08□□□□□ -1.76
SYCP1-210ENST00000618516 TRAV36DV7A0A075B6V5 113 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 A0A087WZY1 265 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 A8MXE2 369 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 TMEM229AB2RXF0 380 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ABCD4O14678 606 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 SMAD7O15105 426 aaKnown RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CHP2O43745 196 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 MITFO75030 526 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NDUFS7O75251 213 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CLUP10909 449 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 BMP2P12643 396 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ACVR1BP36896 505 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 POLR2IP36954 125 aaKnown RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 UBE2NP61088 152 aaKnown RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 TRIP10Q15642 601 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ACKR1Q16570 336 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NRF1Q16656 503 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ODF4Q2M2E3 257 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 HYAL4Q2M3T9 481 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 PHYHD1Q5SRE7 291 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 RNF220Q5VTB9 566 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 GTF2IRD2BQ6EKJ0 949 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 PAQR6Q6TCH4 344 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 THSD4Q6ZMP0 1018 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CBLL1Q75N03 491 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 H1FNTQ75WM6 255 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 GTF2IRD2Q86UP8 949 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 LINC00346Q8IVM7 164 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 BHLHE23Q8NDY6 225 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ZPLD1Q8TCW7 415 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 MUCL1Q96DR8 90 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 FBXO17Q96EF6 278 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ERMAPQ96PL5 475 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NMNAT3Q96T66 252 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 EPYCQ99645 322 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CIB1Q99828 191 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 PTDSS2Q9BVG9 487 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 REEP1Q9H902 201 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CCM2LQ9NUG4 571 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ARMC1Q9NVT9 282 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 MAGEL2Q9UJ55 1249 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NCOA6Q14686 2063 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 IGKV1D-43A0A0B4J1Z2 117 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 A0A1W2PPR1 153 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 XKRYO14609 159 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms