RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 OR8G2PQ6IF36 304 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 GPR87Q9BY21 358 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 PARD6GQ9BYG4 376 aaPredicted RBP14□□□□□ -0.17
COL5A1-208ENST00000618395 DEC1Q9P2X7 70 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 OR2A25A4D2G3 310 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 BCL2L11O43521 198 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 PSMB2P49721 201 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 RGMBQ6NW40 437 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 BAP18Q8IXM2 172 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 TMEM37Q8WXS4 190 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 LPPQ93052 612 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 DDIT4LQ96D03 193 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 EDEM2Q9BV94 578 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 DOCK7Q96N67 2140 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 CSO75390 466 aaKnown RBP14□□□□□ -0.17
COL5A1-208ENST00000618395 TUSC2O75896 110 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 HYAL4Q2M3T9 481 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 OR51S1Q8NGJ8 323 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 OR5L2Q8NGL0 311 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 FOXJ1Q92949 421 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 SUV39H2Q9H5I1 410 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 LOC100289279A0A1B0GTE1 492 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 A0A1B0GUH1 482 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 OR2M5A3KFT3 312 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 CRYBB1P53674 252 aaPredicted RBP14□□□□□ -0.17
COL5A1-208ENST00000618395 CYS1Q717R9 158 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 LRP11Q86VZ4 500 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 NRSN1Q8IZ57 195 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 CLDN19Q8N6F1 224 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 RAB6CQ9H0N0 254 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 MVB12BQ9H7P6 319 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 IL36AQ9UHA7 158 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 C1orf226A1L170 272 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 PIM1P11309 404 aaPredicted RBP14□□□□□ -0.17
COL5A1-208ENST00000618395 HAAOP46952 286 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 RABGGTBP53611 331 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 SELENBP1Q13228 472 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 SECTM1Q8WVN6 248 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 CXorf58Q96LI9 332 aa14□□□□□ -0.17
COL5A1-208ENST00000618395 MAMDC4Q6UXC1 1216 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 GPX8Q8TED1 209 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 OR5K4A6NMS3 321 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 SLC16A5O15375 505 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF728P0DKX0 622 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 HUS1BQ8NHY5 278 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 IKZF4Q9H2S9 585 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 MED17Q9NVC6 651 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 FAM24AA6NFZ4 105 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 ERVFC1-1P60608 527 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 CDONQ4KMG0 1287 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 TXNRD3NBQ6F5E7 133 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 TMEM9BQ9NQ34 198 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 YJEFN3A6XGL0 299 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 GABRR3A8MPY1 467 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF487B1APH4 448 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 CSF3P09919 207 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 NAGAP17050 411 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 SOX18P35713 384 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 CATR1Q13166 79 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 HIST3H3Q16695 136 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 SGPP1Q9BX95 441 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 AKIRIN1Q9H9L7 192 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-208ENST00000618395 FAM171A2A8MVW0 826 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 C9J4A7 227 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 FCGR2CP31995 323 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 CPOXP36551 454 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 NOVA1P51513 510 aaKnown RBP13.99□□□□□ -0.17
COL5A1-208ENST00000618395 MAP2K6P52564 334 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 TAS2R38P59533 333 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 RXFP4Q8TDU9 374 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 OR1F2PQ96R84 312 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 ACTR3CQ9C0K3 210 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-208ENST00000618395 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 C5orf52A6NGY3 159 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 GALNT2Q10471 571 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 RAB6CQ53S08 254 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 OR2G6Q5TZ20 316 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 FRMPD2BQ6IN97 320 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 OR52B6Q8NGF0 335 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-208ENST00000618395 FBXO34Q9NWN3 711 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 GPR160Q9UJ42 338 aa13.99□□□□□ -0.17
COL5A1-208ENST00000618395 ABCC6O95255 1503 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF787Q6DD87 383 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 PRSS35Q8N3Z0 413 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 PHYHIPQ92561 330 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 OR10J1P30954 320 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 IRS1P35568 1242 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 SPRED1Q7Z699 444 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF429Q86V71 674 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 C1orf74Q96LT6 269 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 CASD1Q96PB1 797 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 METTL9Q9H1A3 318 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 PPP1R3CQ9UQK1 317 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 UBIAD1Q9Y5Z9 338 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF30P17039 623 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 SMPD1P17405 629 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 CR2P20023 1033 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 FA2HQ7L5A8 372 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms