RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PSMD9O00233 223 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR2T1O43869 369 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR6A2O95222 327 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 GAAP10253 952 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 CD53P19397 219 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF41P51814 821 aaPredicted RBP15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 GBX2P52951 348 aaPredicted RBP15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 RPS18P62269 152 aaKnown RBP15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 C5orf46Q6UWT4 87 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 LYSMD2Q8IV50 215 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR13C5Q8NGS8 318 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR2T4Q8NH00 348 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 GHSRQ92847 366 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 KCNN2Q9H2S1 579 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 MIXL1Q9H2W2 232 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 SDHAF3Q9NRP4 125 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 FAIMQ9NVQ4 179 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 RALGAPA1Q6GYQ0 2036 aa15.64■□□□□ 0.1
PCDHGC3-205ENST00000617641 A0A1W2PRG6 482 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 PRR32B1ATL7 298 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 XKRYO14609 159 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 GPANK1O95872 356 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 PSMB10P40306 273 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 CAPZA2P47755 286 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 RPL27P61353 136 aaKnown RBP15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 DNASE1L3Q13609 305 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 OXA1LQ15070 435 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 PLPPR5Q32ZL2 321 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 PRAMEF20Q5VT98 475 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 STEAP3Q658P3 488 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 IL20RBQ6UXL0 311 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 RAB11FIP2Q7L804 512 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 SLC16A9Q7RTY1 509 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 NAXDQ8IW45 347 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 KDM8Q8N371 416 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 ABHD4Q8TB40 342 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF519Q8TB69 540 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 STRADBQ9C0K7 418 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF160Q9HCG1 818 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 MRPL39Q9NYK5 338 aaKnown RBP15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 PISDQ9UG56 409 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 FBXL2Q9UKC9 423 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 KLHDC2Q9Y2U9 406 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 CHCHD2Q9Y6H1 151 aaPredicted RBP15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 ALPK2Q86TB3 2170 aa15.64■□□□□ 0.09
PCDHGC3-205ENST00000617641 IGLV3-32A0A0A0MS00 114 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 PFDN1O60925 122 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 F8A1P23610 371 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 MSX1P28360 303 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 RANBP1P43487 201 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 DLX5P56178 289 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR7A5Q15622 319 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF181Q2M3W8 571 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 EEF1A1P5Q5VTE0 462 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 PLEKHG7Q6ZR37 379 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 TIGD4Q8IY51 512 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 M1APQ8TC57 530 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 WDFY2Q96P53 400 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 SDHCQ99643 169 aaPredicted RBP15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 RNF32Q9H0A6 362 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 NSG1A0A0A6YYJ2 146 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 LOC110117498-PIK3R3F6TDL0 507 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 H3BML4 177 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 OGG1O15527 345 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 EFNA2O43921 213 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 TFPIP10646 304 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 HLA-DOBP13765 273 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 SHC1P29353 583 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 RAB15P59190 212 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 SIRPAP78324 504 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 INSM1Q01101 510 aaPredicted RBP15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 MELKQ14680 651 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 CDK5R1Q15078 307 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 TIPARPQ7Z3E1 657 aaKnown RBP15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 CEACAM19Q7Z692 300 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR2M3Q8NG83 312 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 POC1BQ8TC44 478 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 SLX1AQ9BQ83 275 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 TXNIPQ9H3M7 391 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 PADI1Q9ULC6 663 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 V9GYH0 126 aa15.63■□□□□ 0.09
PCDHGC3-205ENST00000617641 ETV2O00321 342 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 SNX4O95219 450 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 EDNRAP25101 427 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 GDI2P50395 445 aaKnown RBP15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 FOXK1P85037 733 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 HSF2Q03933 536 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 TRAM1Q15629 374 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR5M1Q8NGP8 315 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 AP3S1Q92572 193 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 DDIT4LQ96D03 193 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 PRSS37A4D1T9 235 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 AKR7A3O95154 331 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 TGM1P22735 817 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 RPS27P42677 84 aaKnown RBP15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 MTNR1BP49286 362 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 GLYR1Q49A26 553 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZMAT1Q5H9K5 638 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 C6orf15Q6UXA7 325 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 NDUFAF7Q7L592 441 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms