RNA–Protein interactions for RNA: ENST00000613670.4

LIG1-221, Transcript of DNA ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LIG1, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-221ENST00000613670 SCML1Q9UN30 329 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 SPAG17Q6Q759 2223 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 CDK2AP1O14519 115 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 CISD3P0C7P0 127 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ZNF806P0C7X5 589 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ZNF28P17035 718 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 IL12BP29460 328 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 DLSTP36957 453 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 DIO1P49895 249 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 CXADRP78310 365 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ZAR1Q86SH2 424 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 HSD17B8Q92506 261 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 AHCYL2Q96HN2 611 aaKnown RBP11.55□□□□□ -0.56
LIG1-221ENST00000613670 G6PC3Q9BUM1 346 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 FKRPQ9H9S5 495 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ELOVL3Q9HB03 270 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 HRH3Q9Y5N1 445 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 TRAV1-2A0A0B4J238 106 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 LOC105371267A0A1B0GV96 52 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 PVALBP20472 110 aaPredicted RBP11.55□□□□□ -0.56
LIG1-221ENST00000613670 ACHEP22303 614 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 GALP22466 123 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 GAS1P54826 345 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ACSM1Q08AH1 577 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ZNF169Q14929 603 aaPredicted RBP11.55□□□□□ -0.56
LIG1-221ENST00000613670 MEPEQ9NQ76 525 aaPredicted RBP11.55□□□□□ -0.56
LIG1-221ENST00000613670 DUSP22Q9NRW4 184 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 ZNF337Q9Y3M9 751 aa11.55□□□□□ -0.56
LIG1-221ENST00000613670 CDC14CA4D256 554 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ZNF736B4DX44 427 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 FARS2O95363 451 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 HLA-AP01891 365 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 THY1P04216 161 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 RBM34P42696 430 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 ACTBP60709 375 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 PRPS1P60891 318 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ACTG1P63261 375 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 AIMP2Q13155 320 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 ALKBH1Q13686 389 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 STEAP1BQ6NZ63 245 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 UNQ6126/PRO20091Q6UXV3 157 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 STAC2Q6ZMT1 411 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 TRILQ7L0X0 811 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 OR4C16Q8NGL9 310 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 SLC2A12Q8TD20 617 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 WDR89Q96FK6 387 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 KLHL15Q96M94 604 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 UBL7Q96S82 380 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 MYADMQ96S97 322 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 DPYSL5Q9BPU6 564 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 TAS2R5Q9NYW4 299 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 NTMQ9P121 344 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 LRIT1Q9P2V4 623 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 TMEM14AQ9Y6G1 99 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 TMEM82A0PJX8 343 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 METTL21EPA6NDL7 271 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 OTOL1A6NHN0 477 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 E9PQ18 207 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 CD3DP04234 171 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 CEACAM5P06731 702 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ITGA3P26006 1051 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 AGTR1P30556 359 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 LSSP48449 732 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ZNF136P52737 540 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ARFRP1Q13795 201 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 TANGO2Q6ICL3 276 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 GLDNQ6ZMI3 551 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 TMPRSS11FQ6ZWK6 438 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ACBD4Q8NC06 268 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 OR51Q1Q8NH59 317 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 FITM1A5D6W6 292 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 F8W036 122 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ZNF432O94892 652 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 RNH1P13489 461 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 S1PR1P21453 382 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 MAOBP27338 520 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 S100A10P60903 97 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 BLOC1S1P78537 153 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 HLXQ14774 488 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 OR10K2Q6IF99 312 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 LRRC69Q6ZNQ3 347 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 VN1R4Q7Z5H5 301 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 SLC51BQ86UW2 128 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 GTPBP8Q8N3Z3 284 aaPredicted RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 BPIFB2Q8N4F0 458 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 OR2AK2Q8NG84 335 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 OR1E3Q8WZA6 343 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 FBXW5Q969U6 566 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 LRRC46Q96FV0 321 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 INTS14Q96SY0 518 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 ZNF416Q9BWM5 594 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 HDAC8Q9BY41 377 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 METTL8Q9H825 291 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 OR5V1Q9UGF6 321 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 MRPS2Q9Y399 296 aaKnown RBP11.54□□□□□ -0.56
LIG1-221ENST00000613670 AGPAT2O15120 278 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 P2RX6O15547 441 aa11.54□□□□□ -0.56
LIG1-221ENST00000613670 SEC14L5O43304 696 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms