RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OR7A5Q15622 319 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 SLC35D3Q5M8T2 416 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 LEG1Q6P5S2 330 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 SLC16A12Q6ZSM3 486 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 H1FNTQ75WM6 255 aaPredicted RBP8.02□□□□□ -1.13
CCDC47-207ENST00000612558 SHFQ7M4L6 423 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 SYT9Q86SS6 491 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 SCAIQ8N9R8 606 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 LSM14AQ8ND56 463 aaKnown RBP8.02□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF248Q8NDW4 579 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 OR51G2Q8NGK0 314 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF417Q8TAU3 575 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 THAP4Q8WY91 577 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 KISS1RQ969F8 398 aaPredicted RBP8.02□□□□□ -1.13
CCDC47-207ENST00000612558 DNAJA3Q96EY1 480 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 JSRP1Q96MG2 331 aaPredicted RBP8.02□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF587Q96SQ5 575 aaPredicted RBP8.02□□□□□ -1.13
CCDC47-207ENST00000612558 NMNAT2Q9BZQ4 307 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 INPP5EQ9NRR6 644 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 LRFN1Q9P244 771 aa8.02□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF346Q9UL40 294 aaKnown RBP8.02□□□□□ -1.13
CCDC47-207ENST00000612558 OR6C68A6NDL8 312 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 C11orf98E9PRG8 122 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 G3V3Y1 287 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 H3BML4 177 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 CCRL2O00421 344 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ZIC3O60481 467 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 FZD7O75084 574 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 GABARAPO95166 117 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SBK2P0C263 348 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 LIMS3P0CW19 117 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 LIMS4P0CW20 117 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 IMPDH2P12268 514 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SPI1P17947 270 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 CNR1P21554 472 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 AHCYP23526 432 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 PCSK6P29122 969 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 CD96P40200 585 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 DNASE1L1P49184 302 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 DIO1P49895 249 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SLC25A1P53007 311 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 RRADP55042 308 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 RPL27P61353 136 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 PUDPQ08623 228 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MLLT11Q13015 90 aaPredicted RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MYBPHQ13203 477 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 RTP5Q14D33 572 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 CTF1Q16619 201 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 GLYR1Q49A26 553 aaPredicted RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 LCN1P1Q5VSP4 162 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 PAQR6Q6TCH4 344 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 B3GLCTQ6Y288 498 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 LHFPL3Q86UP9 236 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF227Q86WZ6 799 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ACBD7Q8N6N7 88 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ARIH2OSQ8N7S6 290 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 OR5M1Q8NGP8 315 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 OR9Q1Q8NGQ5 310 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 NXPE2Q96DL1 559 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TSPAN32Q96QS1 320 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 UTP23Q9BRU9 249 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TXNIPQ9H3M7 391 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 CHST11Q9NPF2 352 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ISYNA1Q9NPH2 558 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ERVK13-1Q9NX77 482 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ALKBH4Q9NXW9 302 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SEC14L4Q9UDX3 406 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 DKKL1Q9UK85 242 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MOKQ9UQ07 419 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 B3GALT5Q9Y2C3 310 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 HDGFL3Q9Y3E1 203 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 PCDHGB7Q9Y5F8 929 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MED12Q93074 2177 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 FREM3P0C091 2139 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 A0A1W2PRG6 482 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 C12orf71A8MTZ7 269 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MS4A18H0YCH9 400 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 XKRYO14609 159 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SLC22A1O15245 554 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 EFSO43281 561 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SERPINI2O75830 405 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 NEURL1O76050 574 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 RENP00797 406 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 IGHMP01871 453 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 GYPBP06028 91 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF17P17021 662 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TCEA1P23193 301 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SRD5A2P31213 254 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SOX8P57073 446 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TLE3Q04726 772 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 KRR1Q13601 381 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 GGTLC2Q14390 218 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ACKR1Q16570 336 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TSTQ16762 297 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MS4A18Q3C1V0 323 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TMEM176BQ3YBM2 270 aaPredicted RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 OR2G6Q5TZ20 316 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SPINK14Q6IE38 97 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TUBA3EQ6PEY2 450 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms