RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CXCL2P19875 107 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 PTH2RP49190 550 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 BTN1A1Q13410 526 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 GRM7Q14831 915 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 PRAMEF17Q5VTA0 474 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 LRRN1Q6UXK5 716 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 KDM8Q8N371 416 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 BAHD1Q8TBE0 780 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-207ENST00000612273 TSEN15Q8WW01 171 aaKnown RBP12.82□□□□□ -0.36
COL6A1-207ENST00000612273 STACQ99469 402 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 SFXN1Q9H9B4 322 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 GDE1Q9NZC3 331 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 TRAV18A0A075B6X5 111 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 NKX2-2O95096 273 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CTSEP14091 401 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CCKBRP32239 447 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 POU4F2Q12837 409 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CDONQ4KMG0 1287 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 NDUFAF7Q7L592 441 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 HAVCR2Q8TDQ0 301 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 MRGPRX1Q96LB2 322 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CXorf58Q96LI9 332 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 AMELYQ99218 206 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 DHRS9Q9BPW9 319 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 LAMP5Q9UJQ1 280 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 SATB2Q9UPW6 733 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 TCRBV16S1A1N1A0A5B0 115 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 PRR19A6NJB7 356 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 AIPO00170 330 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ARFIP1P53367 373 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 AANATQ16613 207 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 COL28A1Q2UY09 1125 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ALG10Q5BKT4 473 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 GPR139Q6DWJ6 353 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 GLRX5Q86SX6 157 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 OR14A16Q8NHC5 309 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 TNFAIP8L1Q8WVP5 186 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 RLN3Q8WXF3 142 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-207ENST00000612273 C14orf105Q9NVL8 296 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 FRRS1LQ9P0K9 344 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 COPZ2Q9P299 210 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 CELSR3Q9NYQ7 3312 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 RPS10-NUDT3A0A1W2PQS6 291 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 G3V3Q6 166 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ITGA10O75578 1167 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 DPP4P27487 766 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ART1P52961 327 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 MAZP56270 477 aaKnown RBP12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ATXN7L3Q14CW9 347 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-207ENST00000612273 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
COL6A1-207ENST00000612273 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-207ENST00000612273 DGAT2Q96PD7 388 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 SLITRK2Q9H156 845 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 SPAG17Q6Q759 2223 aa12.81□□□□□ -0.36
COL6A1-207ENST00000612273 A0A087WV62 115 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 SPDEFO95238 335 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 WISP1O95388 367 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 GAAP10253 952 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 TAS2R20P59543 309 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 HHEXQ03014 270 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 B3GNTL1Q67FW5 361 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-207ENST00000612273 OR10K2Q6IF99 312 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 MED25Q71SY5 747 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-207ENST00000612273 GSX2Q9BZM3 304 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 CHST6Q9GZX3 395 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 PRTFDC1Q9NRG1 225 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 SOHLH2Q9NX45 425 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 MRM2Q9UI43 246 aaKnown RBP12.8□□□□□ -0.36
COL6A1-207ENST00000612273 UNC13CQ8NB66 2214 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 PTPRSQ13332 1948 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 SERINC4A6NH21 518 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 FNTBP49356 437 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 LTBQ06643 244 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 C4orf46Q504U0 113 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 BCORP1Q8N888 145 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 ANGPTL6Q8NI99 470 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 PRDM9Q9NQV7 894 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 GRHPRQ9UBQ7 328 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 KCNN3Q9UGI6 736 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 DOCK8Q8NF50 2099 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 LOC105371267A0A1B0GV96 52 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 GOSR2O14653 212 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 CREBL2O60519 120 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-207ENST00000612273 CTNSO60931 367 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 AKR7A3O95154 331 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 CT45A8P0DMV1 189 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 CT45A9P0DMV2 189 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 GTF2F2P13984 249 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms