RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HNRNPA1L2Q32P51 320 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 HIKESHIQ53FT3 197 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 SPANXN2Q5MJ10 180 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 PHYHD1Q5SRE7 291 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 AGBL2Q5U5Z8 902 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 CARD17Q5XLA6 110 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 COPS6Q7L5N1 327 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 NANOGNBQ7Z5D8 188 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 VSTM4Q8IW00 320 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 KATNAL2Q8IYT4 538 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 OR2L13Q8N349 312 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF740Q8NDX6 193 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 CATSPER1Q8NEC5 780 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 BPIFCQ8NFQ6 507 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ANGPTL6Q8NI99 470 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 HTR3CQ8WXA8 447 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 CCNL2Q96S94 520 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 CYTH2Q99418 400 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ARHGDIGQ99819 225 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 POLR2J2Q9GZM3 115 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 DNTTIP1Q9H147 329 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 POLR2J3Q9H1A7 115 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ZFP14Q9HCL3 533 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 TREM2Q9NZC2 230 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 UXTQ9UBK9 157 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 CTSFQ9UBX1 484 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 HMGXB4Q9UGU5 601 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ATPIF1Q9UII2 106 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 COPS3Q9UNS2 423 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 CBY1Q9Y3M2 126 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 TIMM10BQ9Y5J6 103 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ATP6V1DQ9Y5K8 247 aa2.97□□□□□ -1.93
SMCHD1-213ENST00000609587 ARHGAP23Q9P227 1491 aa2.96□□□□□ -1.93
SMCHD1-213ENST00000609587 OR2AG2A6NM03 316 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 TCP11X1B4DZS4 312 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 HIP1O00291 1037 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 ABCD4O14678 606 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 LSM1O15116 133 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 FCMRO60667 390 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 PFKFB2O60825 505 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 RBBP9O75884 186 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 AP2A1O95782 977 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC2A3P11169 496 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 COX5AP20674 150 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 FUT3P21217 361 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 HMGB2P26583 209 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 HTR1FP30939 366 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 RRM2P31350 389 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 PTGDSP41222 190 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 MAP3K8P41279 467 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 CASP4P49662 377 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 TSPAN5P62079 268 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 RPS14P62263 151 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 GNB2P62879 340 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 TPM4P67936 248 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 TLE4Q04727 773 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 MAPRE2Q15555 327 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 IL17AQ16552 155 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 EXOC3L2Q2M3D2 409 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 KLF17Q5JT82 389 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 C1orf146Q5VVC0 180 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 PMF1Q6P1K2 205 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 TPGS1Q6ZTW0 290 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 USP50Q70EL3 339 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 GDPD3Q7L5L3 318 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 LRRC6Q86X45 466 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 ECHDC2Q86YB7 292 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 CCDC71LQ8N9Z2 235 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 OR9K2Q8NGE7 335 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 UBA3Q8TBC4 463 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 GLYATL2Q8WU03 294 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 DCUN1D4Q92564 292 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 CIDECQ96AQ7 238 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 SEC22AQ96IW7 307 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 TRNT1Q96Q11 434 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 CHP1Q99653 195 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 BPIFA3Q9BQP9 254 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 C9orf16Q9BUW7 83 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 NUP58Q9BVL2 599 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 RAB34Q9BZG1 259 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 FAM192AQ9GZU8 254 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 ASB8Q9H765 288 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 NEK6Q9HC98 313 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 APMAPQ9HDC9 416 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 LZTFL1Q9NQ48 299 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 ABCB10Q9NRK6 738 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 SMOXQ9NWM0 555 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 FKBP14Q9NWM8 211 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 IL37Q9NZH6 218 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 EMC3Q9P0I2 261 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 PRPF19Q9UMS4 504 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC22A14Q9Y267 594 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 POLDIP2Q9Y2S7 368 aa2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 ZNF646O15015 1829 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-213ENST00000609587 LRRK1Q38SD2 2015 aa2.95□□□□□ -1.94
SMCHD1-213ENST00000609587 TRAV25A0A0B4J276 109 aa2.95□□□□□ -1.94
SMCHD1-213ENST00000609587 LRRIQ3A6PVS8 624 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-213ENST00000609587 IDSB3KWA1 339 aa2.95□□□□□ -1.94
SMCHD1-213ENST00000609587 H0Y9J4 135 aa2.95□□□□□ -1.94
SMCHD1-213ENST00000609587 RGS16O15492 202 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms