RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	TFAP2E	Q6VUC0	442 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ASCL4	Q6XD76	172 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF534	Q76KX8	674 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LACC1	Q8IV20	430 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR4K14	Q8NGD5	310 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TRUB1	Q8WWH5	349 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RTP4	Q96DX8	246 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MUS81	Q96NY9	551 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RNF2	Q99496	336 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PIGV	Q9NUD9	493 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SALL4	Q9UJQ4	1053 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PPM1H	Q9ULR3	514 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MALRD1	Q5VYJ5	2156 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR5B21	A6NL26	309 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF716	A6NP11	495 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	FAAH	O00519	579 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CYR61	O00622	381 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	P2RX6	O15547	441 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SOX15	O60248	233 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PRSS1	P07477	247 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MARCKSL1	P49006	195 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SLC25A52	Q3SY17	297 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PHLDA2	Q53GA4	152 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF385B	Q569K4	471 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	H2BFWT	Q7Z2G1	175 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PIGZ	Q86VD9	579 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TXNRD3	Q86VQ6	643 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	DRAXIN	Q8NBI3	349 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR4F6	Q8NGB9	312 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RPL3L	Q92901	407 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RTP3	Q9BQQ7	232 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ULBP3	Q9BZM4	244 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LYRM2	Q9NU23	88 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PRELID3B	Q9Y3B1	194 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ARPC3	O15145	178 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	IRAK2	O43187	625 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TBX10	O75333	385 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	NDUFB7	P17568	137 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ELK1	P19419	428 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	EN2	P19622	333 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SLC6A8	P48029	635 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ADPRH	P54922	357 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	WDR4	P57081	412 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PAX5	Q02548	391 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	KCNAB2	Q13303	367 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ARSI	Q5FYB1	569 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ABHD17B	Q5VST6	288 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TMIGD1	Q6UXZ0	262 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GKN2	Q86XP6	184 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	KMT5C	Q86Y97	462 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR52R1	Q8NGF1	315 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR5W2	Q8NH69	310 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	BCL2L2	Q92843	193 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CMBL	Q96DG6	245 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	KIRREL1	Q96J84	757 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MCHR1	Q99705	422 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR51B5	Q9H339	312 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LIN7B	Q9HAP6	207 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TMEM184B	Q9Y519	407 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	STYXL1	Q9Y6J8	313 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SLC22A31	A6NKX4	558 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LRRC30	A6NM36	301 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	UBE2Q2L	H0YL09	131 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	POP4	O95707	220 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CRISP2	P16562	243 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	NAGA	P17050	411 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RIPPLY1	Q0D2K3	151 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TAF10	Q12962	218 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF528	Q3MIS6	628 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	DACT2	Q5SW24	774 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF626	Q68DY1	528 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CATSPERD	Q86XM0	798 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	FBXL6	Q8N531	539 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LSMEM1	Q8N8F7	131 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR4S1	Q8NGB4	309 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR4F15	Q8NGB8	312 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR5D18	Q8NGL1	313 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	DYNC2LI1	Q8TCX1	351 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PSMG2	Q969U7	264 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MOCOS	Q96EN8	888 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SEC22C	Q9BRL7	303 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LRFN3	Q9BTN0	628 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ENKD1	Q9H0I2	346 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SUV39H2	Q9H5I1	410 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZMAT3	Q9HA38	289 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	IL36A	Q9UHA7	158 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RPL26L1	Q9UNX3	145 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR51B4	Q9Y5P0	310 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	HIVEP3	Q5T1R4	2406 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CDC14C	A4D256	554 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624		M0QZ24	198 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MAN2B1	O00754	1011 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	DENR	O43583	198 aa	Known RBP	3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GPR37L1	O60883	481 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GGT1	P19440	569 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RPS13	P62277	151 aa	Known RBP	3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CATR1	Q13166	79 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	AMMECR1L	Q6DCA0	310 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR5M10	Q6IEU7	315 aa		3.8	□□□□□ -1.8
KCNMA1-223	ENST00000604624	WDR73	Q6P4I2	378 aa		3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms