RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RTP5Q14D33 572 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CPSF6Q16630 551 aaKnown RBP eCLIP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 VPS26BQ4G0F5 336 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 MED27Q6P2C8 311 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM71Q6P5X7 295 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF562Q6V9R5 426 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CYHR1Q6ZMK1 362 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 DET1Q7L5Y6 550 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 DPY19L4Q7Z388 723 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PEG10Q86TG7 708 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 HAPLN4Q86UW8 402 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TRIM48Q8IWZ4 208 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 OR11L1Q8NGX0 322 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CCDC126Q96EE4 140 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 SENP5Q96HI0 755 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 OMDQ99983 421 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 AMNQ9BXJ7 453 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TPSD1Q9BZJ3 242 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PCBD2Q9H0N5 130 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PHPT1Q9NRX4 125 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 A4GNTQ9UNA3 340 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TEX13DA0A0J9YY54 714 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GLYATL1P3A0A0U1RQE8 302 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 FEZF1A0PJY2 475 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PRSS46E5RG02 174 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 M0R233 179 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PPIHO43447 177 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 AP2A1O95782 977 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CLIC3O95833 236 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C6orf47O95873 294 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 IFNA5P01569 189 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CD5P06127 495 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR56A5P0C7T3 313 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 P2RY2P41231 377 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 IDH2P48735 452 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NUMBP49757 651 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 JAK3P52333 1124 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CTSWP56202 376 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 LSM6P62312 80 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PITPNAQ00169 270 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TWF1Q12792 350 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SKP2Q13309 424 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GRB14Q14449 540 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CARD16Q5EG05 197 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 DCAF10Q5QP82 559 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GRHL2Q6ISB3 625 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PLET1Q6UQ28 207 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TMPRSS12Q86WS5 348 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CIR1Q86X95 450 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZBTB8OSQ8IWT0 167 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 KLHDC8AQ8IYD2 350 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF683Q8IZ20 524 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SYNE4Q8N205 404 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SVBPQ8N300 66 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C12orf76Q8N812 135 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR2L2Q8NH16 312 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR52I2Q8NH67 350 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ABHD5Q8WTS1 349 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC35F5Q8WV83 523 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PCNPQ8WW12 178 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 DNAJC19Q96DA6 116 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RAB3CQ96E17 227 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CENPNQ96H22 339 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PRMT6Q96LA8 375 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CCDC3Q9BQI4 270 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NDUFAF3Q9BU61 184 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 FICDQ9BVA6 458 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NMNAT2Q9BZQ4 307 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 UPF3AQ9H1J1 476 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 MTHFD2LQ9H903 347 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 WDR41Q9HAD4 459 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C3orf14Q9HBI5 128 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 AGPAT4Q9NRZ5 378 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PACSIN3Q9UKS6 424 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SIT1Q9Y3P8 196 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OAS3Q9Y6K5 1087 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM95CA0A1B0GW59 222 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TRDCB7Z8K6 153 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 F5H6K3 240 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NDUFS4O43181 175 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC25A12O75746 678 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CFDP00746 253 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 EGFP01133 1207 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GPIP06744 558 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CD22P20273 847 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF134P52741 427 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CLDN20P56880 219 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RAP1BP61224 184 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SORDQ00796 357 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 FPGSQ05932 587 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GAB1Q13480 694 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 EIF4HQ15056 248 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RNPS1Q15287 305 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CDKN3Q16667 212 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NDUFAF6Q330K2 333 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SOHLH1Q5JUK2 328 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NKAIN2Q5VXU1 208 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CES5AQ6NT32 575 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms