RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CA10Q9NS85 328 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 RHCGQ9UBD6 479 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 LIMD1Q9UGP4 676 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 A0A087WZY1 265 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 PGPEP1LA6NFU8 196 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 GGT3PA6NGU5 568 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 TISP43B9A030 160 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 B9A039 149 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FAM157AC9JC47 383 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FAM86B1E9PN63 330 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 F5H0A9 414 aaPredicted RBP8.15□□□□□ -1.1
COMMD3-215ENST00000602574 F5H5P2 479 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FARS2O95363 451 aaKnown RBP8.15□□□□□ -1.1
COMMD3-215ENST00000602574 C1RP00736 705 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FAM86B2P0C5J1 330 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 BCKDHAP12694 445 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 TACR2P21452 398 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 GJA5P36382 358 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 PPIGQ13427 754 aaKnown RBP eCLIP8.15□□□□□ -1.1
COMMD3-215ENST00000602574 IL10RAQ13651 578 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 DECR1Q16698 335 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 PHYKPLQ8IUZ5 450 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FAM86B1Q8N7N1 296 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 B3GNT7Q8NFL0 401 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 OR4E2Q8NGC2 313 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 OR5L1Q8NGL2 311 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 OR1J2Q8NGS2 313 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 OR2A12Q8NGT7 310 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 WNT2BQ93097 391 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 SLC35E1Q96K37 410 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 C4orf36Q96KX1 117 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 SMAD5Q99717 465 aaKnown RBP8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FSD1LQ9BXM9 530 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 CXorf36Q9H7Y0 433 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 CHODLQ9H9P2 273 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 BTG4Q9NY30 223 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 SLC22A13Q9Y226 551 aa8.15□□□□□ -1.1
COMMD3-215ENST00000602574 FNDC3AQ9Y2H6 1198 aaKnown RBP8.15□□□□□ -1.1
COMMD3-215ENST00000602574 TBL2Q9Y4P3 447 aaKnown RBP8.15□□□□□ -1.1
COMMD3-215ENST00000602574 STRCQ7RTU9 1775 aa8.15□□□□□ -1.11
COMMD3-215ENST00000602574 A0A1W2PNV4 684 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 RNASEK-C17orf49H0YIS7 233 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CTDSPLO15194 276 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 LANCL1O43813 399 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CSO75390 466 aaKnown RBP8.14□□□□□ -1.11
COMMD3-215ENST00000602574 METTL18O95568 372 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 GIPRP48546 466 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 AKR1C2P52895 323 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ERVFRD-1P60508 538 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 YBX1P67809 324 aaKnown RBP8.14□□□□□ -1.11
COMMD3-215ENST00000602574 AKR1C1Q04828 323 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 AWAT1Q58HT5 328 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ALG10BQ5I7T1 473 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MRPL21Q7Z2W9 205 aaKnown RBP8.14□□□□□ -1.11
COMMD3-215ENST00000602574 OR52P1PQ8NH57 321 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ARRDC2Q8TBH0 407 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 RHBDD1Q8TEB9 315 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CASTOR1Q8WTX7 329 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ALG14Q96F25 216 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MAGT1Q9H0U3 335 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 DHX35Q9H5Z1 703 aaKnown RBP8.14□□□□□ -1.11
COMMD3-215ENST00000602574 AKTIPQ9H8T0 292 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM140Q9NV12 185 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 P4HTMQ9NXG6 502 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FLRT1Q9NZU1 646 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FZD4Q9ULV1 537 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 HDGFL3Q9Y3E1 203 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 IGLV3-22A0A075B6J6 115 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ELOVL7A1L3X0 281 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MANBAO00462 879 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MFSD11O43934 449 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CTSVO60911 334 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FBXO24O75426 580 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 SLC25A4P12235 298 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 RAB6AP20340 208 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 HNRNPA2B1P22626 353 aaKnown RBP8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CD1CP29017 333 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MMP15P51511 669 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 PITPNAQ00169 270 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 IRF9Q00978 393 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MELKQ14680 651 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ZBTB6Q15916 424 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ZSWIM7Q19AV6 140 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 SLC22A6Q4U2R8 563 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FSTL4Q6MZW2 842 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 LINGO4Q6UY18 593 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM183AQ8IXX5 376 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 GTPBP8Q8N3Z3 284 aaPredicted RBP8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FAM24BQ8N5W8 94 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 SLC35G3Q8N808 338 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CCDC71LQ8N9Z2 235 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 RNF149Q8NC42 400 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 OR2T12Q8NG77 320 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 OR51D1Q8NGF3 324 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 OR4D5Q8NGN0 318 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 PYURFQ96I23 114 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MIEN1Q9BRT3 115 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ACTRT3Q9BYD9 372 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF350Q9GZX5 532 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms