RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 TCF7L1Q9HCS4 588 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 EIF3KQ9UBQ5 218 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 TMEM131Q92545 1883 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 G3V3Q6 166 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 GMFGO60234 142 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 CDK2P24941 298 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 SDHAP31040 664 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 SKP2Q13309 424 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 Q499Y3 187 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 FNDC7Q5VTL7 733 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 C1orf216Q8TAB5 229 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 S100A16Q96FQ6 103 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 LPAR4Q99677 370 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 DPCDQ9BVM2 203 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 SCP2D1Q9UJQ7 156 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 CYP8B1Q9UNU6 501 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 RNF215Q9Y6U7 377 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 ARPC1BO15143 372 aaKnown RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 SRPX2O60687 465 aaPredicted RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 NSA2O95478 260 aaKnown RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 UBL4AP11441 157 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 SLC25A1P53007 311 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 SKP1P63208 163 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 ALKBH1Q13686 389 aaKnown RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 SLC6A19Q695T7 634 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 NLRC3Q7RTR2 1065 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 OR2T4Q8NH00 348 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 ANGPTL6Q8NI99 470 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 KTI12Q96EK9 354 aaPredicted RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 SORCS2Q96PQ0 1159 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF275Q9NSD4 429 aaPredicted RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 AKAP7Q9P0M2 348 aaPredicted RBP18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 FKBP7Q9Y680 259 aa18.39■□□□□ 0.54
SHKBP1-225ENST00000600733 MPC2O95563 127 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 GPANK1O95872 356 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 ECDO95905 644 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 TACSTD2P09758 323 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 TMIGD3P0DMS9 266 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 PNMTP11086 282 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 P2RX1P51575 399 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 ODF4Q2M2E3 257 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 ZNF440Q8IYI8 595 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 PCNPQ8WW12 178 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 TOE1Q96GM8 510 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 SEC22CQ9BRL7 303 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 LRRC61Q9BV99 259 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 UBQLN4Q9NRR5 601 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 CD207Q9UJ71 328 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 IKZF2Q9UKS7 526 aa18.39■□□□□ 0.53
SHKBP1-225ENST00000600733 C17orf105B2RV13 164 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 CRYZL1O95825 349 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 ABHD16AO95870 558 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 ASAH2BP0C7U1 165 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 DCTDP32321 178 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 RPL18Q07020 188 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 PLA2G7Q13093 441 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 GRM7Q14831 915 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 COL28A1Q2UY09 1125 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 MESTQ5EB52 335 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 SLC25A25Q6KCM7 469 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 SEZ6L2Q6UXD5 910 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 KANSL1Q7Z3B3 1105 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 OR6V1Q8N148 313 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 OR10AC1Q8NH08 325 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 NXPE2Q96DL1 559 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 GRHPRQ9UBQ7 328 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 NPTNQ9Y639 398 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 TGM6O95932 706 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 RAD52P43351 418 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 PPM1FP49593 454 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 OTPQ5XKR4 325 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 RFPL4BQ6ZWI9 263 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 TMPRSS12Q86WS5 348 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 OR51A4Q8NGJ6 313 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 HAVCR1Q96D42 359 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 TSPAN32Q96QS1 320 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 ELF4Q99607 663 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 CHIAQ9BZP6 476 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 WDR76Q9H967 626 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 DIABLOQ9NR28 239 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 RABL2AQ9UBK7 228 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 RABL2BQ9UNT1 228 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 THADAQ6YHU6 1953 aa18.38■□□□□ 0.53
SHKBP1-225ENST00000600733 TRAV8-7A0A075B6U6 113 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 C10orf142B7Z368 130 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 AKR7A3O95154 331 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 MAS1P04201 325 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 ENPP1P22413 925 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 MAOBP27338 520 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 HSD17B7P56937 341 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 AP3S2P59780 193 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 SNTA1Q13424 505 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 POU4F3Q15319 338 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 KIAA0895LQ68EN5 471 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 DPY19L4Q7Z388 723 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 CDC20BQ86Y33 519 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 OR6N2Q8NGY6 317 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 OR8K3Q8NH51 312 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 ZNF578Q96N58 590 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 SLITRK2Q9H156 845 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms