RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 A0A087WUU8 490 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 SLC35F4A4IF30 521 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 OR6C65A6NJZ3 312 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 ZNF587BE7ETH6 402 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 C11orf98E9PRG8 122 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 SLC43A1O75387 559 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 ADORA3P0DMS8 318 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 ROR2Q01974 943 aaKnown RBP13.79□□□□□ -0.2
RPS28-203ENST00000600659 RPL18Q07020 188 aaKnown RBP13.79□□□□□ -0.2
RPS28-203ENST00000600659 C1DQ13901 141 aaKnown RBP13.79□□□□□ -0.2
RPS28-203ENST00000600659 ACKR1Q16570 336 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 HIKESHIQ53FT3 197 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 OR7E24Q6IFN5 339 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 RINLQ6ZS11 566 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 PIK3C3Q8NEB9 887 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 BCL2L2Q92843 193 aaPredicted RBP13.79□□□□□ -0.2
RPS28-203ENST00000600659 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 SGTBQ96EQ0 304 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 NSL1Q96IY1 281 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 DHRS1Q96LJ7 313 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 HS6ST2Q96MM7 605 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 FOXC2Q99958 501 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 GPR35Q9HC97 309 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 RPS6KA6Q9UK32 745 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 ENPP4Q9Y6X5 453 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 ITPR3Q14573 2671 aa13.79□□□□□ -0.2
RPS28-203ENST00000600659 ZNF503-AS2A6NEH8 195 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 B2RBV5 119 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 SHISA9B4DS77 424 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 IFNGR1P15260 489 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 MAKP20794 623 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 AHCYP23526 432 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 RPS4XP62701 263 aaKnown RBP13.78□□□□□ -0.2
RPS28-203ENST00000600659 IL1RL1Q01638 556 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 SPOCK1Q08629 439 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 FOXD4Q12950 439 aaPredicted RBP13.78□□□□□ -0.2
RPS28-203ENST00000600659 TBRG1Q3YBR2 411 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 ADAM5Q6NVV9 412 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 SLC35D2Q76EJ3 337 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 MEX3DQ86XN8 651 aaKnown RBP13.78□□□□□ -0.2
RPS28-203ENST00000600659 KRTAP1-3Q8IUG1 177 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 ANKK1Q8NFD2 765 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 KBTBD8Q8NFY9 601 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 LRR1Q96L50 414 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 UBTD1Q9HAC8 227 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 MAGEL2Q9UJ55 1249 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 SAMD4AQ9UPU9 718 aaKnown RBP13.78□□□□□ -0.2
RPS28-203ENST00000600659 MED31Q9Y3C7 131 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
RPS28-203ENST00000600659 TEP1Q99973 2627 aaKnown RBP13.77□□□□□ -0.2
RPS28-203ENST00000600659 HS3ST1O14792 307 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 AKAP8O43823 692 aaKnown RBP13.77□□□□□ -0.21
RPS28-203ENST00000600659 SERPINI2O75830 405 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 CDH2P19022 906 aaPredicted RBP13.77□□□□□ -0.21
RPS28-203ENST00000600659 ATP6V1B2P21281 511 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 CALB2P22676 271 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 DNASE1P24855 282 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 AQP2P41181 271 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 ART1P52961 327 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 TGFBR3Q03167 851 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 CAMK2DQ13557 499 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 MELKQ14680 651 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 TRAM2Q15035 370 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 CEACAM16Q2WEN9 425 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 DEFB113Q30KQ7 82 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 SPATS1Q496A3 300 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 CARD17Q5XLA6 110 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 TBPL2Q6SJ96 375 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 SPNS3Q6ZMD2 512 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 NANOGNBQ7Z5D8 188 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 ABHD12BQ7Z5M8 362 aaPredicted RBP13.77□□□□□ -0.21
RPS28-203ENST00000600659 NRMQ8IXM6 262 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 LRRC75AQ8NAA5 344 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 MOSPD2Q8NHP6 518 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 SLC7A13Q8TCU3 470 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
RPS28-203ENST00000600659 BCAS4Q8TDM0 211 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
RPS28-203ENST00000600659 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 FUZQ9BT04 418 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 ESRP2Q9H6T0 727 aaKnown RBP13.77□□□□□ -0.21
RPS28-203ENST00000600659 NMNAT1Q9HAN9 279 aaPredicted RBP13.77□□□□□ -0.21
RPS28-203ENST00000600659 CRLF2Q9HC73 371 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 NDE1Q9NXR1 346 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 HIF3AQ9Y2N7 669 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 AMDHD2Q9Y303 409 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 V9GYQ6 96 aa13.77□□□□□ -0.21
RPS28-203ENST00000600659 ARPC4-TTLL3A0A0A6YYG9 625 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 hCG_2039718K7EN88 272 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 RNF13O43567 381 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 DIRAS1O95057 198 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 CD3EP07766 207 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 PGA4P0DJD7 388 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 PGA3P0DJD8 388 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 UMPSP11172 480 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 IFI30P13284 250 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 CD40P25942 277 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms