RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 KLHL14Q9P2G3 628 aa15.23■□□□□ 0.03
SHKBP1-223ENST00000600552 USP22Q9UPT9 525 aa15.23■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF726A6NNF4 738 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 LRRN3E7EW58 273 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 LYNX1G3V0Z9 82 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 MS4A18H0YCH9 400 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 RPL36A-HNRNPH2H7BZ11 118 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 TRAF3IP2O43734 574 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF500O60304 480 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 STAMBPO95630 424 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 IGKV3-15P01624 115 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ADRA2AP08913 450 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 LYNX1P0DP58 116 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 BMP2P12643 396 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 HNF1AP20823 631 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 SLC6A2P23975 617 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ARR3P36575 388 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 PPOXP50336 477 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 POU3F1Q03052 451 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 OR1Q1Q15612 314 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 EFNB3Q15768 340 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ADRM1Q16186 407 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 MS4A18Q3C1V0 323 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 KRTAP24-1Q3LI83 254 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 DHRS4L2Q6PKH6 230 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 BLOC1S3Q6QNY0 202 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 C6orf89Q6UWU4 347 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF813Q6ZN06 617 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 NET1Q7Z628 596 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 CDK20Q8IZL9 346 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 NUP37Q8NFH4 326 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 OR6N1Q8NGY5 312 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 LRRC8CQ8TDW0 803 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 CKAP2Q8WWK9 683 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 SLC35B4Q969S0 331 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ANKRD27Q96NW4 1050 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF317Q96PQ6 595 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF607Q96SK3 696 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 C12orf10Q9HB07 376 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 MYOZ1Q9NP98 299 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 SLCO1B3Q9NPD5 702 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 B3GAT2Q9NPZ5 323 aa15.22■□□□□ 0.03
SHKBP1-223ENST00000600552 A0A087WUJ7 227 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF99A8MXY4 864 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 EVPLLA8MZ36 301 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 C11orf98E9PRG8 122 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 ERLIN1O75477 346 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 PDE5AO76074 875 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF23P17027 643 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 HOXB9P17482 250 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 TCN1P20061 433 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 C3orf36Q3SXR2 165 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 C5orf46Q6UWT4 87 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 ARMC8Q8IUR7 673 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 C20orf196Q8IYI0 205 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 TMEM123Q8N131 208 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 LSMEM1Q8N8F7 131 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 SMYD1Q8NB12 490 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 ZNF540Q8NDQ6 660 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 THOC1Q96FV9 657 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 MS4A3Q96HJ5 214 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 MOGAT1Q96PD6 335 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 SNX18Q96RF0 628 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 EPYCQ99645 322 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 DOK1Q99704 481 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 WFDC6Q9BQY6 131 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 SOX7Q9BT81 388 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 IKZF5Q9H5V7 419 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 NOX3Q9HBY0 568 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 MOV10Q9HCE1 1003 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 CMAHPQ9Y471 501 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 NOX1Q9Y5S8 564 aa15.21■□□□□ 0.03
SHKBP1-223ENST00000600552 TMEM129A0AVI4 362 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 M0R3H8 397 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 SERPINB7O75635 380 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 BGLAPP02818 100 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 IFNGR1P15260 489 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 B4GALT1P15291 398 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 PPIBP23284 216 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 PTDSS1P48651 473 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 CDH12P55289 794 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 CR1LQ2VPA4 569 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 LRIF1Q5T3J3 769 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 GKAP1Q5VSY0 366 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 RANBP3LQ86VV4 465 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 WDFY1Q8IWB7 410 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 FAM169BQ8N8A8 192 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 ANKK1Q8NFD2 765 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 UBASH3BQ8TF42 649 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 DYDC1Q8WWB3 177 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 ZNF442Q9H7R0 627 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 TESQ9UGI8 421 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 FZR1Q9UM11 496 aa15.2■□□□□ 0.02
SHKBP1-223ENST00000600552 PRORSD1PA6NEY8 169 aa15.19■□□□□ 0.02
SHKBP1-223ENST00000600552 OR6A2O95222 327 aa15.19■□□□□ 0.02
SHKBP1-223ENST00000600552 OPN1SWP03999 348 aa15.19■□□□□ 0.02
SHKBP1-223ENST00000600552 APEX1P27695 318 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-223ENST00000600552 IL2RGP31785 369 aa15.19■□□□□ 0.02
SHKBP1-223ENST00000600552 CCNIQ14094 377 aa15.19■□□□□ 0.02
SHKBP1-223ENST00000600552 MFSD13AQ14CX5 517 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms