RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 DCAF10Q5QP82 559 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 C3orf33Q6P1S2 294 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 H1FNTQ75WM6 255 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-218ENST00000600383 SSX6Q7RTT6 188 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 TMPRSS12Q86WS5 348 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 OR6V1Q8N148 313 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 TRMT61AQ96FX7 289 aaKnown RBP13.66□□□□□ -0.22
HIF3A-218ENST00000600383 TIMP4Q99727 224 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 TMED9Q9BVK6 235 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 BABAM2Q9NXR7 383 aa13.66□□□□□ -0.22
HIF3A-218ENST00000600383 A0A1W2PRG6 482 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 MS4A18H0YCH9 400 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 GLCEO94923 617 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 EIF1P41567 113 aaKnown RBP13.65□□□□□ -0.22
HIF3A-218ENST00000600383 CENPAP49450 140 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 ENTPD1P49961 510 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 MAP2K6P52564 334 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 DLX5P56178 289 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 RPS25P62851 125 aaKnown RBP13.65□□□□□ -0.22
HIF3A-218ENST00000600383 TUBA1BP68363 451 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 TPBGQ13641 420 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 MFSD13AQ14CX5 517 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 MS4A18Q3C1V0 323 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 CRTC2Q53ET0 693 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-218ENST00000600383 TIGD3Q6B0B8 471 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 SPINK14Q6IE38 97 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 TMEM81Q6P7N7 255 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 TUBA1AQ71U36 451 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 SLC35F2Q8IXU6 374 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 KBTBD8Q8NFY9 601 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 SLC39A7Q92504 469 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 C4orf36Q96KX1 117 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 NUAK2Q9H093 628 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 TXNIPQ9H3M7 391 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 CORINQ9Y5Q5 1042 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 PMF1-BGLAPU3KQ54 211 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 ASPMQ8IZT6 3477 aa13.65□□□□□ -0.22
HIF3A-218ENST00000600383 LIPT2A6NK58 231 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 LIFP15018 202 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 UGT2B10P36537 528 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 ACTC1P68032 377 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 ACTA1P68133 377 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 SLC35D3Q5M8T2 416 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 RAET1LQ5VY80 246 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 POMGNT2Q8NAT1 580 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 OR2T4Q8NH00 348 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 ADAMTS17Q8TE56 1095 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 ZBTB8AQ96BR9 441 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 FOXN4Q96NZ1 517 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 POTEKPQ9BYX7 375 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 ISYNA1Q9NPH2 558 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 INPP5EQ9NRR6 644 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 DKKL1Q9UK85 242 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 PCDHGB7Q9Y5F8 929 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 CUL9Q8IWT3 2517 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 PTPRZ1P23471 2315 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-218ENST00000600383 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 TVP23AA6NH52 213 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 SNPHO15079 494 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 SNX4O95219 450 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 GPANK1O95872 356 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 MT-ND5P03915 603 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 OR2T7P0C7T2 308 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 SHC1P29353 583 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 LIMK1P53667 647 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 DSCR4P56555 118 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-218ENST00000600383 OR2B6P58173 313 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 TP53I3Q53FA7 332 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 LINC01590Q5TEZ4 76 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 ABHD17BQ5VST6 288 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 C22orf42Q6IC83 251 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 OR2T27Q8NH04 317 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 SNX33Q8WV41 574 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 HDHD5Q9BXW7 423 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 TPK1Q9H3S4 243 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 CCDC86Q9H6F5 360 aaKnown RBP13.64□□□□□ -0.23
HIF3A-218ENST00000600383 CHST11Q9NPF2 352 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 SACM1LQ9NTJ5 587 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 TEKT2Q9UIF3 430 aa13.64□□□□□ -0.23
HIF3A-218ENST00000600383 E9PI62 339 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 PSMD9O00233 223 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 SLC30A4O14863 429 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 CBR3O75828 277 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 HLA-DQA2P01906 255 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 IFNGR1P15260 489 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 ADH6P28332 368 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 SLC25A1P53007 311 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 POU3F1Q03052 451 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-218ENST00000600383 RUNX1T1Q06455 604 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 DYNC1I2Q13409 638 aaKnown RBP13.63□□□□□ -0.23
HIF3A-218ENST00000600383 GGTLC2Q14390 218 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 ATP1A1-AS1Q5TC04 95 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 OTPQ5XKR4 325 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 RPTNQ6XPR3 784 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 SYT14Q8NB59 555 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 OR6S1Q8NH40 331 aa13.63□□□□□ -0.23
HIF3A-218ENST00000600383 KIAA1143Q96AT1 154 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms