RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CALB2P22676 271 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 DNASE1P24855 282 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 POU3F1Q03052 451 aaPredicted RBP14.2□□□□□ -0.14
LSM4-206ENST00000600289 STK11Q15831 433 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 ADAM5Q6NVV9 412 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 Q71RC1 249 aaPredicted RBP14.2□□□□□ -0.14
LSM4-206ENST00000600289 ARHGAP24Q8N264 748 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 RNF148Q8N7C7 305 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 PIK3C3Q8NEB9 887 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 NSL1Q96IY1 281 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 LRR1Q96L50 414 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 CDRT15Q96T59 188 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 ANKRD19PQ9H560 264 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 OBP2BQ9NPH6 170 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 MAN2C1Q9NTJ4 1040 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 TAS2R5Q9NYW4 299 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 AMDHD2Q9Y303 409 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 MED31Q9Y3C7 131 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 SNX13Q9Y5W8 968 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 FFAR1O14842 300 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 UPK3AO75631 287 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 OR7A10O76100 309 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 ADORA3P0DMS8 318 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 HLA-DOBP13765 273 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 PAX7P23759 505 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 TRAM2Q15035 370 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 ZNF704Q6ZNC4 412 aaPredicted RBP14.19□□□□□ -0.14
LSM4-206ENST00000600289 C20orf204Q6ZNR8 217 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 FKBP9P1Q75LS8 142 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 LINGO2Q7L985 606 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 TSEN54Q7Z6J9 526 aaKnown RBP14.19□□□□□ -0.14
LSM4-206ENST00000600289 DEFB107AQ8IZN7 70 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 WDR31Q8NA23 367 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 PFN4Q8NHR9 129 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 MAGEE2Q8TD90 523 aaPredicted RBP14.19□□□□□ -0.14
LSM4-206ENST00000600289 SGTBQ96EQ0 304 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 ADAD1Q96M93 576 aaKnown RBP14.19□□□□□ -0.14
LSM4-206ENST00000600289 ALKBH3Q96Q83 286 aaPredicted RBP14.19□□□□□ -0.14
LSM4-206ENST00000600289 SMR3AQ99954 134 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 SLC17A5Q9NRA2 495 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 NPAP1Q9NZP6 1156 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 MAGED1Q9Y5V3 778 aaPredicted RBP14.19□□□□□ -0.14
LSM4-206ENST00000600289 ENPP4Q9Y6X5 453 aa14.19□□□□□ -0.14
LSM4-206ENST00000600289 B2RBV5 119 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 KRT33AO76009 404 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 OR6A2O95222 327 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 SEMG1P04279 462 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 HIST1H2ABP04908 130 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
LSM4-206ENST00000600289 MXRA7P84157 204 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 IL1RL1Q01638 556 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 LGALS3BPQ08380 585 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 ACKR1Q16570 336 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 HIST3H2AQ7L7L0 130 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 NANOGNBQ7Z5D8 188 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 CYP4Z1Q86W10 505 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 C20orf196Q8IYI0 205 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 RNF113BQ8IZP6 322 aaKnown RBP14.18□□□□□ -0.14
LSM4-206ENST00000600289 LRRC17Q8N6Y2 441 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 FAM156AQ8NDB6 213 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 RBM15BQ8NDT2 890 aaKnown RBP14.18□□□□□ -0.14
LSM4-206ENST00000600289 OR1K1Q8NGR3 316 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 HIST1H2ACQ93077 130 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 C7orf34Q96L11 122 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 ALPK1Q96QP1 1244 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 PIP5K1AQ99755 562 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 FNDC11Q9BVV2 318 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 C1orf21Q9H246 121 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 C20orf141Q9NUB4 165 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 RNF115Q9Y4L5 304 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 DSCAMO60469 2012 aa14.18□□□□□ -0.14
LSM4-206ENST00000600289 ARPC4-TTLL3A0A0A6YYG9 625 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 SLC35F4A4IF30 521 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 DPRXA6NFQ7 191 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 NPIPB13A6NJU9 1138 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 NPIPB4C9JG80 1138 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 J3KTA2 159 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 ARPC2O15144 300 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 CD3EP07766 207 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 T-ENOLP0DO92 83 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 CD53P19397 219 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 FUT1P19526 365 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 AHCYP23526 432 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 ROR2Q01974 943 aaKnown RBP14.17□□□□□ -0.14
LSM4-206ENST00000600289 BSPH1Q075Z2 132 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 ANKDD1AQ495B1 522 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 HMBOX1Q6NT76 420 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 ANKRD16Q6P6B7 361 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 GPR137CQ8N3F9 429 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 OR6X1Q8NH79 312 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 BCAS4Q8TDM0 211 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 IGFBPL1Q8WX77 278 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 ACOT11Q8WXI4 607 aaPredicted RBP14.17□□□□□ -0.14
LSM4-206ENST00000600289 MUC13Q9H3R2 512 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 GPR35Q9HC97 309 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 MOV10Q9HCE1 1003 aaKnown RBP14.17□□□□□ -0.14
LSM4-206ENST00000600289 CCM2LQ9NUG4 571 aaPredicted RBP14.17□□□□□ -0.14
LSM4-206ENST00000600289 MED29Q9NX70 200 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 NDUFAF4Q9P032 175 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 PLEKHA6Q9Y2H5 1048 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms