RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 MFSD8Q8NHS3 518 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.37
IRF3-223ENST00000599223 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 MCUR1Q96AQ8 359 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 NOX3Q9HBY0 568 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 RCE1Q9Y256 329 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 IGHV2OR16-5A0A0B4J2B6 119 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 B2RBV5 119 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 hCG_2039718K7EN88 272 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 M0R082 166 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 TRAF3IP2O43734 574 aaPredicted RBP12.7□□□□□ -0.38
IRF3-223ENST00000599223 ANP32DO95626 131 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 COX4I1P13073 169 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 ZNF23P17027 643 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 THBS2P35442 1172 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 SH3BGRP55822 239 aaPredicted RBP12.7□□□□□ -0.38
IRF3-223ENST00000599223 ZSWIM7Q19AV6 140 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 CEACAM16Q2WEN9 425 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 C3orf36Q3SXR2 165 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 ZNF311Q5JNZ3 666 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 SLC2A7Q6PXP3 512 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 MDP1Q86V88 176 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 TREML1Q86YW5 311 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 CDK20Q8IZL9 346 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 ZNF417Q8TAU3 575 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 TAAR8Q969N4 342 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 ITCHQ96J02 903 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 ZNF587Q96SQ5 575 aaPredicted RBP12.7□□□□□ -0.38
IRF3-223ENST00000599223 BTBD10Q9BSF8 475 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
IRF3-223ENST00000599223 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 GPR35Q9HC97 309 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
IRF3-223ENST00000599223 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 PCDHB14Q9Y5E9 798 aa12.7□□□□□ -0.38
IRF3-223ENST00000599223 A0A0G2JPF8 293 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 A0A1B0GWA3 101 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 TMEM129A0AVI4 362 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 OR6C65A6NJZ3 312 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 HNRNPCL2B2RXH8 293 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 HNRNPCL3B7ZW38 293 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 RPL36A-HNRNPH2H7BZ11 118 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 STAMBPO95630 424 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 HPRP00739 348 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 HNRNPCL4P0DMR1 293 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 T-ENOLP0DO92 83 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 BMP2P12643 396 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 POLR2JP52435 117 aaKnown RBP12.69□□□□□ -0.38
IRF3-223ENST00000599223 NPRL3Q12980 569 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 RGNQ15493 299 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 CR1LQ2VPA4 569 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 MMEL1Q495T6 779 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 IQCCQ4KMZ1 466 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 AGKQ53H12 422 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 MSANTD1Q6ZTZ1 278 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 FAM169BQ8N8A8 192 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 GTF2H4Q92759 462 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 OR2M2Q96R28 347 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 DOK1Q99704 481 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 C1orf21Q9H246 121 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 CRLF2Q9HC73 371 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
IRF3-223ENST00000599223 LOC100653049A0A140TA62 436 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 LILRA1O75019 489 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 SLC43A1O75387 559 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 KRT34O76011 436 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 TGFAP01135 160 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 HLA-DOBP13765 273 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 DAOP14920 347 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 NQO1P15559 274 aaKnown RBP12.68□□□□□ -0.38
IRF3-223ENST00000599223 CBR1P16152 277 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 ZNF43P17038 809 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 CBLP22681 906 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 GIFP27352 417 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 GTF2E2P29084 291 aaKnown RBP12.68□□□□□ -0.38
IRF3-223ENST00000599223 GRPRP30550 384 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
IRF3-223ENST00000599223 TRIP10Q15642 601 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 C16orf89Q6UX73 402 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 ASRGL1Q7L266 308 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 SNX32Q86XE0 403 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 POU5F2Q8N7G0 328 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 OR4F15Q8NGB8 312 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 WFDC6Q9BQY6 131 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 MMADHCQ9H3L0 296 aaPredicted RBP12.68□□□□□ -0.38
IRF3-223ENST00000599223 ZNF385DQ9H6B1 395 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 RMND5AQ9H871 391 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 EFCAB1Q9HAE3 211 aa12.68□□□□□ -0.38
IRF3-223ENST00000599223 BBIP1A8MTZ0 92 aa12.67□□□□□ -0.38
IRF3-223ENST00000599223 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
IRF3-223ENST00000599223 CLIC1O00299 241 aa12.67□□□□□ -0.38
IRF3-223ENST00000599223 AIM2O14862 343 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms