RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 CKAP2Q8WWK9 683 aa9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 NEU4Q8WWR8 484 aaPredicted RBP9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 RACGAP1Q9H0H5 632 aa9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 RAB1BQ9H0U4 201 aa9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 MED29Q9NX70 200 aa9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 TMEFF2Q9UIK5 374 aaPredicted RBP9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 RAB21Q9UL25 225 aa9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 IFT52Q9Y366 437 aa9.49□□□□□ -0.89
GRAMD1A-209ENST00000598580 TRAV36DV7A0A075B6V5 113 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 A0A087WUJ7 227 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ZNF99A8MXY4 864 aaPredicted RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 FAM157AC9JC47 383 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 AIM2O14862 343 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 UBDO15205 165 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 VENTXO95231 258 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 LYPD3O95274 346 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ANP32DO95626 131 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 C8BP07358 591 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 HNF1AP20823 631 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ARR3P36575 388 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 SH3BGRP55822 239 aaPredicted RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 SNTB2Q13425 540 aaKnown RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 C1DQ13901 141 aaKnown RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 CCNIQ14094 377 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 MAD2L1BPQ15013 274 aaPredicted RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 FXNQ16595 210 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 PAGE3Q5JUK9 113 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 C6orf10Q5SRN2 563 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 FAM69AQ5T7M9 428 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 DHRS4L2Q6PKH6 230 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 EPGNQ6UW88 154 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 MSANTD1Q6ZTZ1 278 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ZNF627Q7L945 461 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 TSPYL5Q86VY4 417 aaPredicted RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ZNF584Q8IVC4 421 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 KIRREL3Q8IZU9 778 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 GPR137CQ8N3F9 429 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 LINC01356Q8N9X3 169 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ZNF540Q8NDQ6 660 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 HPS1Q92902 700 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 YIPF5Q969M3 257 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 SLC35B4Q969S0 331 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 MRPL24Q96A35 216 aaKnown RBP9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 FZR1Q9UM11 496 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 PKD1L1Q8TDX9 2849 aa9.48□□□□□ -0.89
GRAMD1A-209ENST00000598580 ZNF500O60304 480 aaPredicted RBP9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 NCR1O76036 304 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 THY1P04216 161 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 ARAFP10398 606 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 ETS2P15036 469 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 IFNGR1P15260 489 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 B4GALT1P15291 398 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 PAX7P23759 505 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 PRKAR1BP31321 381 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 ALDH3B1P43353 468 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 CHN2P52757 468 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 CAMK2DQ13557 499 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 SQLEQ14534 574 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 MFSD13AQ14CX5 517 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 LRIF1Q5T3J3 769 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 C1orf229Q6ZS94 237 aaPredicted RBP9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 PAQR4Q8N4S7 273 aaPredicted RBP9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 ADPRHL1Q8NDY3 354 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 PIK3C3Q8NEB9 887 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 CLDND2Q8NHS1 167 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 BBS10Q8TAM1 723 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 SLC38A4Q969I6 547 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 ANKRD27Q96NW4 1050 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 SYT3Q9BQG1 590 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 RMND5AQ9H871 391 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 C12orf10Q9HB07 376 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 VAPAQ9P0L0 249 aa9.47□□□□□ -0.89
GRAMD1A-209ENST00000598580 A0A0B4J2E0 115 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 A0A1B0GX12 115 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 HAX1O00165 279 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 PLPP3O14495 311 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 OR2T1O43869 369 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 AVPP01185 164 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 CD79AP11912 226 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 CAPZA2P47755 286 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 GIPRP48546 466 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 MRPL19P49406 292 aaKnown RBP9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 CDH12P55289 794 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 LMO4P61968 165 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 CDK6Q00534 326 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 IL1RL1Q01638 556 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 POU3F1Q03052 451 aaPredicted RBP9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 OR1Q1Q15612 314 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 NPTX1Q15818 432 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 ALG10BQ5I7T1 473 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 ULK3Q6PHR2 472 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 LRFN4Q6PJG9 635 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 BLOC1S3Q6QNY0 202 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 LINC00114Q6XXX2 140 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 ZNF813Q6ZN06 617 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 DEF8Q6ZN54 512 aa9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 NET1Q7Z628 596 aaPredicted RBP9.46□□□□□ -0.9
GRAMD1A-209ENST00000598580 UEVLDQ8IX04 471 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms