RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SF3B5Q9BWJ5 86 aaKnown RBP13.82□□□□□ -0.2
UPF1-206ENST00000598471 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
UPF1-206ENST00000598471 H2AFY2Q9P0M6 372 aaPredicted RBP13.82□□□□□ -0.2
UPF1-206ENST00000598471 EPG5Q9HCE0 2579 aa13.82□□□□□ -0.2
UPF1-206ENST00000598471 OR14I1A6ND48 311 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 NPIPA2E9PIF3 369 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 NPIPA3F8WFD2 350 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 SMAD9O15198 467 aaKnown RBP13.81□□□□□ -0.2
UPF1-206ENST00000598471 AKAP8O43823 692 aaKnown RBP13.81□□□□□ -0.2
UPF1-206ENST00000598471 BCL10O95999 233 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 RENP00797 406 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 CCDC159P0C7I6 412 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 HIST1H1CP16403 213 aaKnown RBP13.81□□□□□ -0.2
UPF1-206ENST00000598471 GABRB1P18505 474 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 ACVR1BP36896 505 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 EFNB1P98172 346 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 KLRB1Q12918 225 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 KRTCAP3Q53RY4 240 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 GHDCQ8N2G8 530 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 KDM8Q8N371 416 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 OR4K13Q8NH42 304 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 RFKQ969G6 155 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 ZNF566Q969W8 418 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 OTULINQ96BN8 352 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 WDYHV1Q96HA8 205 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 GPR137Q96N19 417 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 PRRG4Q9BZD6 226 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 PRDM14Q9GZV8 571 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 SLC25A18Q9H1K4 315 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 DNAJC27Q9NZQ0 273 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 B3GAT1Q9P2W7 334 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 ZNF346Q9UL40 294 aaKnown RBP13.81□□□□□ -0.2
UPF1-206ENST00000598471 GPR52Q9Y2T5 361 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 TPRKBQ9Y3C4 175 aa13.81□□□□□ -0.2
UPF1-206ENST00000598471 PKD1L2Q7Z442 2459 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 IGHV3-15A0A0B4J1V0 119 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 MAGEA13PA6NCF6 341 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 SLC1A7O00341 560 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 FAM20BO75063 409 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
UPF1-206ENST00000598471 SLC2A10O95528 541 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 RPSAP08865 295 aaKnown RBP13.8□□□□□ -0.2
UPF1-206ENST00000598471 IFNGR1P15260 489 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 FMO3P31513 532 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 LGALS3BPQ08380 585 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 ITGADQ13349 1161 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 CRMP1Q14194 572 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 SF3B4Q15427 424 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■□□□ 14
UPF1-206ENST00000598471 EEF1A1P5Q5VTE0 462 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 NXNL2Q5VZ03 156 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 ABLIM2Q6H8Q1 611 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 LEG1Q6P5S2 330 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 FCRLAQ7L513 359 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 SLC37A3Q8NCC5 494 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 SDR9C7Q8NEX9 313 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 BPIFB6Q8NFQ5 453 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 ZNF519Q8TB69 540 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 APH1BQ8WW43 257 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 ADAD1Q96M93 576 aaKnown RBP13.8□□□□□ -0.2
UPF1-206ENST00000598471 BBC3Q96PG8 261 aaPredicted RBP13.8□□□□□ -0.2
UPF1-206ENST00000598471 SNX18Q96RF0 628 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 UCN2Q96RP3 112 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
UPF1-206ENST00000598471 KLHL13Q9P2N7 655 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 PCDHGB5Q9Y5G0 923 aa13.8□□□□□ -0.2
UPF1-206ENST00000598471 KDM4EB2RXH2 506 aaPredicted RBP13.79□□□□□ -0.2
UPF1-206ENST00000598471 ZNF814B7Z6K7 855 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 ERVH48-1M5A8F1 160 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 PRODHO43272 600 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 ARHGEF9O43307 516 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 TRAF3IP2O43734 574 aaPredicted RBP13.79□□□□□ -0.2
UPF1-206ENST00000598471 CYTIPO60759 359 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 ENTPD6O75354 484 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 FCGR2AP12318 317 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 NR2C1P13056 603 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 HLA-DOBP13765 273 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 LY6DQ14210 128 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 MELKQ14680 651 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 C3AR1Q16581 482 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 KCTD21Q4G0X4 260 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 MESTQ5EB52 335 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 PLBD1Q6P4A8 553 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 CPOQ8IVL8 374 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 MCEMP1Q8IX19 187 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 Q8NA96 180 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 OR9K2Q8NGE7 335 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 ROBO4Q8WZ75 1007 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 ZNF845Q96IR2 970 aaPredicted RBP13.79□□□□□ -0.2
UPF1-206ENST00000598471 ZNF582Q96NG8 517 aaPredicted RBP13.79□□□□□ -0.2
UPF1-206ENST00000598471 NMNAT3Q96T66 252 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 PLCXD1Q9NUJ7 323 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 EMC3Q9P0I2 261 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 KLHL9Q9P2J3 617 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 AASSQ9UDR5 926 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.79□□□□□ -0.2
UPF1-206ENST00000598471 RPL36Q9Y3U8 105 aaKnown RBP13.79□□□□□ -0.2
UPF1-206ENST00000598471 ZNF175Q9Y473 711 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 LOC400499M0QZD8 3231 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms