RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SLC3A1Q07837 685 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 FOXF1Q12946 379 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 DCAF12Q5T6F0 453 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 SLC6A19Q695T7 634 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 OR6V1Q8N148 313 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 PELI1Q96FA3 418 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 WIF1Q9Y5W5 379 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 PRR32B1ATL7 298 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 RGS5O15539 181 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 RGS9O75916 674 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 AHSA1O95433 338 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 MT-CO3P00414 261 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 AHCYP23526 432 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ACVR1BP36896 505 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 CASP3P42574 277 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 RUNX1T1Q06455 604 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 CDONQ4KMG0 1287 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 HES3Q5TGS1 186 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 CDCP2Q5VXM1 449 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 GPR139Q6DWJ6 353 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 DMKNQ6E0U4 476 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 LAX1Q8IWV1 398 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 OR11G2Q8NGC1 345 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 NEIL3Q8TAT5 605 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF417Q8TAU3 575 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ADAMTS14Q8WXS8 1223 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 PGLYRP3Q96LB9 341 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF587Q96SQ5 575 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 PPIL3Q9H2H8 161 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 MARCH7Q9H992 704 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 INIPQ9NRY2 104 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ST6GALNAC2Q9UJ37 374 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 PLPP3O14495 311 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ARHGEF9O43307 516 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 EFNA2O43921 213 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 NCR1O76036 304 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 GAAP10253 952 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ID4P47928 161 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 DLX5P56178 289 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 RPS18P62269 152 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ACKR1Q16570 336 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 FAM83FQ8NEG4 500 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ASB15Q8WXK1 588 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 NDEL1Q9GZM8 345 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 SYT4Q9H2B2 425 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 ABCB10Q9NRK6 738 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 AKAP7Q9P0M2 348 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 POLHQ9Y253 713 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 PCDHGB7Q9Y5F8 929 aa15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 CHCHD2Q9Y6H1 151 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-216ENST00000598201 IGLV3-32A0A0A0MS00 114 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 CASKO14936 926 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 TBX1O43435 398 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 UPK1BO75841 260 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 GALP22466 123 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 GTF2E2P29084 291 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 APOBEC1P41238 236 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 FOLR3P41439 243 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 TAS2R43P59537 309 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 TIPARPQ7Z3E1 657 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 PM20D2Q8IYS1 436 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 SYS1Q8N2H4 156 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 SNX33Q8WV41 574 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 WDR70Q9NW82 654 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 DAPK2Q9UIK4 370 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 FBXL2Q9UKC9 423 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 PSMD9O00233 223 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 ETV2O00321 342 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 GPANK1O95872 356 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 TCEA1P23193 301 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 PSMD7P51665 324 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 ACTA2P62736 377 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 ACTG2P63267 376 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 FOXK1P85037 733 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 EXT1Q16394 746 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 SPANXN2Q5MJ10 180 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 FAM27D1Q5T7N8 215 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 RAB11FIP2Q7L804 512 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 TMPRSS12Q86WS5 348 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 KDM8Q8N371 416 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF519Q8TB69 540 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 POC1BQ8TC44 478 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 GHSRQ92847 366 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 CEP19Q96LK0 163 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 SDHCQ99643 169 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 SLC30A2Q9BRI3 323 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 MROQ9BYG7 248 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 MIXL1Q9H2W2 232 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF160Q9HCG1 818 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 POLE4Q9NR33 117 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 ACOXLQ9NUZ1 547 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 PISDQ9UG56 409 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 GNG8Q9UK08 70 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 MOKQ9UQ07 419 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 KLHDC2Q9Y2U9 406 aa15.36■□□□□ 0.05
SHKBP1-216ENST00000598201 SLC35F4A4IF30 521 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 TVP23AA6NH52 213 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 OR2T1O43869 369 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 RENP00797 406 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 HLA-DOBP13765 273 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms