RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ABHD12BQ7Z5M8 362 aaPredicted RBP19.98■□□□□ 0.79
IRF3-220ENST00000598108 C20orf196Q8IYI0 205 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 DEFB107AQ8IZN7 70 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 C17orf78Q8N4C9 275 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 OR1K1Q8NGR3 316 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 AKAP1Q92667 903 aaKnown RBP eCLIP19.98■□□□□ 0.79
IRF3-220ENST00000598108 BCL2L2Q92843 193 aaPredicted RBP19.98■□□□□ 0.79
IRF3-220ENST00000598108 SGTBQ96EQ0 304 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 BOD1Q96IK1 185 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 NSL1Q96IY1 281 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 HS6ST2Q96MM7 605 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 FNDC11Q9BVV2 318 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 CXXC4Q9H2H0 198 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 GPR35Q9HC97 309 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 RNF115Q9Y4L5 304 aa19.98■□□□□ 0.79
IRF3-220ENST00000598108 PRRC2AP48634 2157 aaKnown RBP19.98■□□□□ 0.79
IRF3-220ENST00000598108 B2RBV5 119 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 RPL36A-HNRNPH2H7BZ11 118 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 HIST1H2ABP04908 130 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 T-ENOLP0DO92 83 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 IFNGR1P15260 489 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 SAMD4BQ5PRF9 694 aaKnown RBP19.97■□□□□ 0.79
IRF3-220ENST00000598108 HMBOX1Q6NT76 420 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 C16orf89Q6UX73 402 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 HIST3H2AQ7L7L0 130 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 SSX8Q7RTT4 187 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 OFCC1Q8IZS5 231 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 HIST1H2ACQ93077 130 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 GORASP2Q9H8Y8 452 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 RPS6KA6Q9UK32 745 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 MED31Q9Y3C7 131 aa19.97■□□□□ 0.79
IRF3-220ENST00000598108 BLOC1S5-TXNDC5H3BN57 136 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 M0R3G1 203 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 HS3ST1O14792 307 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 IGF2P01344 180 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 ARF1P84077 181 aaKnown RBP19.96■□□□□ 0.79
IRF3-220ENST00000598108 MXRA7P84157 204 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 CAMK2DQ13557 499 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 TBRG1Q3YBR2 411 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 ADAM5Q6NVV9 412 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 SPNS3Q6ZMD2 512 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 MEX3DQ86XN8 651 aaKnown RBP19.96■□□□□ 0.79
IRF3-220ENST00000598108 GPR137CQ8N3F9 429 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 PIK3C3Q8NEB9 887 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 KBTBD8Q8NFY9 601 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 NELFAQ9H3P2 528 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 CRLF2Q9HC73 371 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 ENPP4Q9Y6X5 453 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 CADP27708 2225 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 CELSR1Q9NYQ6 3014 aa19.96■□□□□ 0.79
IRF3-220ENST00000598108 A0A096LPE4 126 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 A0A1W2PPZ6 126 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 RNF13O43567 381 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 AKAP8O43823 692 aaKnown RBP19.95■□□□□ 0.78
IRF3-220ENST00000598108 AQP2P41181 271 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 BIDP55957 195 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 PRPS1P60891 318 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 TRAM2Q15035 370 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 CEACAM16Q2WEN9 425 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 SLC35D2Q76EJ3 337 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 NANOGNBQ7Z5D8 188 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 ANKK1Q8NFD2 765 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 LIPHQ8WWY8 451 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 C7orf34Q96L11 122 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 LRR1Q96L50 414 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 ALPK1Q96QP1 1244 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 NDUFAF4Q9P032 175 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 AMDHD2Q9Y303 409 aa19.95■□□□□ 0.78
IRF3-220ENST00000598108 ZNF726A6NNF4 738 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 SHISA9B4DS77 424 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 M0R1B8 84 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 ABCD4O14678 606 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 GMNNO75496 209 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 CD40P25942 277 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 IFNA8P32881 189 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 MNAT1P51948 309 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 RPL18Q07020 188 aaKnown RBP19.94■□□□□ 0.78
IRF3-220ENST00000598108 LAPTM4AQ15012 233 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 ANKRD16Q6P6B7 361 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 TBPL2Q6SJ96 375 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 C20orf204Q6ZNR8 217 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 RINLQ6ZS11 566 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 MOSPD2Q8NHP6 518 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 IGFBPL1Q8WX77 278 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 NMNAT1Q9HAN9 279 aaPredicted RBP19.94■□□□□ 0.78
IRF3-220ENST00000598108 NDE1Q9NXR1 346 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 V9GYQ6 96 aa19.94■□□□□ 0.78
IRF3-220ENST00000598108 A0A087WUU8 490 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 ARPC2O15144 300 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 F13BP05160 661 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 TSPAN19P0C672 248 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 IFI30P13284 250 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 MAKP20794 623 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 TUBA1BP68363 451 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 TUBA4AP68366 448 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 SPOCK1Q08629 439 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 MELKQ14680 651 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 ZNF672Q499Z4 452 aaPredicted RBP19.93■□□□□ 0.78
IRF3-220ENST00000598108 IQCCQ4KMZ1 466 aa19.93■□□□□ 0.78
IRF3-220ENST00000598108 TMEM108Q6UXF1 575 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms