RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 H1FNTQ75WM6 255 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 TMEM200AQ86VY9 491 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 ADPRHL1Q8NDY3 354 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 CYGBQ8WWM9 190 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF184Q99676 751 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 TIMP4Q99727 224 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 PRRG3Q9BZD7 231 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 OR52D1Q9H346 318 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 LIME1Q9H400 295 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 EGLN3Q9H6Z9 239 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 REV1Q9UBZ9 1251 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 ST6GALNAC2Q9UJ37 374 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 TINAGQ9UJW2 476 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 MCTS1Q9ULC4 181 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 B3GALT5Q9Y2C3 310 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 HIF3AQ9Y2N7 669 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 INTS1Q8N201 2190 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 NPIPA2E9PIF3 369 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 NPIPA3F8WFD2 350 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 H0YC42 278 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 RNF13O43567 381 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC19A2O60779 497 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 FZD7O75084 574 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 WISP2O76076 250 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 AKR7A3O95154 331 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 INHBBP09529 407 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 CPN1P15169 458 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 ENPP1P22413 925 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 AHCYP23526 432 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 UQCRC1P31930 480 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 AQP2P41181 271 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 SUCLG1P53597 346 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 TPD52P55327 224 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 CLDN15P56746 228 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 RPL18Q07020 188 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 PUDPQ08623 228 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 NPRL3Q12980 569 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 SF3B4Q15427 424 aaKnown RBP eCLIP10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 ALG10Q5BKT4 473 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 CLEC12AQ5QGZ9 265 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 PAQR6Q6TCH4 344 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 NCCRP1Q6ZVX7 275 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 KIF18BQ86Y91 864 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 DHRSXQ8N5I4 330 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 ADGRG7Q96K78 797 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 SAMD8Q96LT4 415 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF570Q96NI8 536 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 TNFRSF13CQ96RJ3 184 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 MBOAT4Q96T53 435 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 ADI1Q9BV57 179 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 IFT27Q9BW83 186 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 TSSK6Q9BXA6 273 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 SRXN1Q9BYN0 137 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 PRDM14Q9GZV8 571 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 Q9H521 79 aa10.75□□□□□ -0.69
SHKBP1-213ENST00000597325 A0A1W2PNV4 684 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 A0A1W2PRG6 482 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 AQP7P3A6NL99 342 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 C11orf98E9PRG8 122 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 PLPP3O14495 311 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 SERPINI2O75830 405 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 FCGR2AP12318 317 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 ABOP16442 354 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 PTGS2P35354 604 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 CAPGP40121 348 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 RPS6KA3P51812 740 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 RBPJQ06330 500 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF239Q16600 458 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 TTC23Q5W5X9 447 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 TMEM225Q6GV28 225 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC27A4Q6P1M0 643 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 GPAT4Q86UL3 456 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 TMEM99Q8N816 258 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 WFDC11Q8NEX6 87 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 ANKK1Q8NFD2 765 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 OR2T33Q8NG76 320 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 MOSPD2Q8NHP6 518 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 WDYHV1Q96HA8 205 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 POLDIP3Q9BY77 421 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 PRRG4Q9BZD6 226 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 PLA2G12AQ9BZM1 189 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 INIPQ9NRY2 104 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 IL20Q9NYY1 176 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 SEC14L4Q9UDX3 406 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 IL20RAQ9UHF4 553 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 BAIAP2Q9UQB8 552 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 RASD1Q9Y272 281 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF835Q9Y2P0 537 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 MEMO1Q9Y316 297 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 GMPPBQ9Y5P6 360 aa10.74□□□□□ -0.69
SHKBP1-213ENST00000597325 IGHV3-15A0A0B4J1V0 119 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 FIGNL2A6NMB9 653 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 MCIDASD6RGH6 385 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 H0YAE9 185 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 PTP4A3O75365 173 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 VAMP5O95183 116 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 TP53P04637 393 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 IGFBP1P08833 259 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 NOS3P29474 1203 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 DAP3P51398 398 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms