RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ZNF587Q96SQ5 575 aaPredicted RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 MBOAT4Q96T53 435 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 TACO1Q9BSH4 297 aaKnown RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 ASPNQ9BXN1 380 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 GABARAPL3Q9BY60 117 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 EGLN3Q9H6Z9 239 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 MCCC2Q9HCC0 563 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 MRPL39Q9NYK5 338 aaKnown RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 IL20Q9NYY1 176 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 SEC14L4Q9UDX3 406 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 ING1Q9UK53 422 aaPredicted RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 TACC2O95359 2948 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 BLOC1S5-TXNDC5H3BN57 136 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 C19orf84I3L1E1 186 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 EPHA2P29317 976 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 UQCRC1P31930 480 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 ESRRGP62508 458 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 NPRL3Q12980 569 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 PMS2P3Q13401 168 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 GUSBP1Q15486 140 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 ANKDD1AQ495B1 522 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 SLC36A3Q495N2 470 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 H1FNTQ75WM6 255 aaPredicted RBP13.33□□□□□ -0.28
TRIM28-207ENST00000597136 BTLAQ7Z6A9 289 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 CLDN22Q8N7P3 220 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 TMEM99Q8N816 258 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 OR5J2Q8NH18 312 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 FANK1Q8TC84 345 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 RNF128Q8TEB7 428 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 STARD4Q96DR4 205 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 ENKD1Q9H0I2 346 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 KLHL13Q9P2N7 655 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF629Q9UEG4 869 aaPredicted RBP13.33□□□□□ -0.28
TRIM28-207ENST00000597136 ENOPH1Q9UHY7 261 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 HIF3AQ9Y2N7 669 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 CDH10Q9Y6N8 788 aa13.33□□□□□ -0.28
TRIM28-207ENST00000597136 H3BN98 237 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 PLPP3O14495 311 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 DNPH1O43598 174 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 AKR7A3O95154 331 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 POU1F1P28069 291 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 GTF2E2P29084 291 aaKnown RBP13.32□□□□□ -0.28
TRIM28-207ENST00000597136 CRISP1P54107 249 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 H3F3AP84243 136 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 PAQR6Q6TCH4 344 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 NANOGNBQ7Z5D8 188 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 TUSC5Q8IXB3 177 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 OR8D4Q8NGM9 314 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 SAMD8Q96LT4 415 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 ZFP3Q96NJ6 502 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 PLA2G12AQ9BZM1 189 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 OR52D1Q9H346 318 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 TAS2R5Q9NYW4 299 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 B3GALT5Q9Y2C3 310 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 LRBAP50851 2863 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
TRIM28-207ENST00000597136 DVL2O14641 736 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 EIF1BO60739 113 aaKnown RBP13.32□□□□□ -0.28
TRIM28-207ENST00000597136 FCGR2AP12318 317 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 OPRM1P35372 400 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 AQP2P41181 271 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 P2RY4P51582 365 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 PRPS1P60891 318 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 RPL18Q07020 188 aaKnown RBP13.32□□□□□ -0.28
TRIM28-207ENST00000597136 TFF3Q07654 80 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 RASGEF1BQ0VAM2 473 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 RPL13AP3Q6NVV1 102 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 NUFIP2Q7Z417 695 aaKnown RBP13.32□□□□□ -0.28
TRIM28-207ENST00000597136 ADPRHL1Q8NDY3 354 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 MOSPD2Q8NHP6 518 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF184Q99676 751 aaPredicted RBP13.32□□□□□ -0.28
TRIM28-207ENST00000597136 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 KCNJ16Q9NPI9 418 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 FAM118AQ9NWS6 357 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 ABCA12Q86UK0 2595 aa13.32□□□□□ -0.28
TRIM28-207ENST00000597136 AKAP6Q13023 2319 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 CADP27708 2225 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 AQP7P3A6NL99 342 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 PRSS44E7EML9 344 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 E9PQ18 207 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 MS4A18H0YCH9 400 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 CYTIPO60759 359 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 NDUFB2O95178 105 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 IL18BPO95998 194 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 PLGP00747 810 aaPredicted RBP13.31□□□□□ -0.28
TRIM28-207ENST00000597136 CGAP01215 116 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 NTF4P34130 210 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 HSPA13P48723 471 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 PTGES3Q15185 160 aaKnown RBP13.31□□□□□ -0.28
TRIM28-207ENST00000597136 TAF11Q15544 211 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 MS4A18Q3C1V0 323 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms