RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 WISP2O76076 250 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 VAMP5O95183 116 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 CPN1P15169 458 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 AHCYP23526 432 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 SLC15A1P46059 708 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 CARD18P57730 90 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 HSF1Q00613 529 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 CRMP1Q14194 572 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 POU4F3Q15319 338 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 NXNL2Q5VZ03 156 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 KDM8Q8N371 416 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 MEIOBQ8N635 442 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 ARIH2OSQ8N7S6 290 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 OR52E2Q8NGJ4 325 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 ZHX1-C8orf76Q96EF9 292 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 SNX18Q96RF0 628 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 SIGLEC11Q96RL6 698 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 TIMP4Q99727 224 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 GRHPRQ9UBQ7 328 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 PSORS1C1Q9UIG5 152 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 LAMA5O15230 3695 aa13.17□□□□□ -0.3
SHKBP1-211ENST00000595945 ARHGAP21Q5T5U3 1957 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 ATMQ13315 3056 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 A0A1W2PRG6 482 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 AQP7O14520 342 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 FAM20BO75063 409 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 FAM87AP0C7U9 286 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 ZNF3P17036 446 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 ENPP1P22413 925 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 SLC2A5P22732 501 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 NOS3P29474 1203 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 NUDT6P53370 316 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 SLC35A2P78381 396 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 POU3F1Q03052 451 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 APOFQ13790 326 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 FAM205BPQ63HN1 556 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 ABLIM2Q6H8Q1 611 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 ADCK1Q86TW2 530 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 WDFY1Q8IWB7 410 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 UEVLDQ8IX04 471 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 UBQLNLQ8IYU4 475 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 EXD3Q8N9H8 876 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 CYB561A3Q8NBI2 242 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 BBS1Q8NFJ9 593 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 ZPLD1Q8TCW7 415 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 GGHQ92820 318 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 CPNE4Q96A23 557 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 WDYHV1Q96HA8 205 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 TXNDC15Q96J42 360 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 RHNO1Q9BSD3 238 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 MRPS18AQ9NVS2 196 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 PAK1IP1Q9NWT1 392 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 SCN3BQ9NY72 215 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 BLOC1S6Q9UL45 172 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 TPRKBQ9Y3C4 175 aa13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 PHF3Q92576 2039 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-211ENST00000595945 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 CCDC182A6NF36 153 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 A6NIZ1 184 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 FAM183AA6NL82 134 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 CLCA1A8K7I4 914 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 HTR1AP08908 422 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 IFNGR1P15260 489 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 ACVR2AP27037 513 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 ACVR1BP36896 505 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 EIF1AXP47813 144 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 DAP3P51398 398 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 SLC25A1P53007 311 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 CDH15P55291 814 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 RAP1BP61224 184 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 RPS3AP61247 264 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 RAP1AP62834 184 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 ZNF91Q05481 1191 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 TMED1Q13445 227 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 SLC17A1Q14916 467 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 ZNF324BQ6AW86 544 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 TMEM225Q6GV28 225 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 NIPAL3Q6P499 406 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 JAZF1Q86VZ6 243 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 Q8NA96 180 aa13.15□□□□□ -0.3
SHKBP1-211ENST00000595945 IPCEF1Q8WWN9 437 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms