RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 BMP2P12643 396 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 HOXB9P17482 250 aaPredicted RBP14.09□□□□□ -0.15
LIG1-205ENST00000593425 POLR2JP52435 117 aaKnown RBP14.09□□□□□ -0.15
LIG1-205ENST00000593425 MS4A18Q3C1V0 323 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 SLC2A7Q6PXP3 512 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 H1FNTQ75WM6 255 aaPredicted RBP14.09□□□□□ -0.15
LIG1-205ENST00000593425 LSMEM1Q8N8F7 131 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 GTF2H4Q92759 462 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 MRPL24Q96A35 216 aaKnown RBP14.09□□□□□ -0.15
LIG1-205ENST00000593425 ZNF75AQ96N20 296 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 OR52B2Q96RD2 323 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 KLHL14Q9P2G3 628 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 CMAHPQ9Y471 501 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 TRAV36DV7A0A075B6V5 113 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 LOC102725191A0A1B0GVB3 256 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 CLIC1O00299 241 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 ZNF14P17017 642 aaPredicted RBP14.08□□□□□ -0.16
LIG1-205ENST00000593425 NR4A1P22736 598 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 PRKAR1BP31321 381 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 DVL1P1P54792 670 aaPredicted RBP14.08□□□□□ -0.16
LIG1-205ENST00000593425 POU3F1Q03052 451 aaPredicted RBP14.08□□□□□ -0.16
LIG1-205ENST00000593425 GSG1Q2KHT4 349 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 GLIPR1L2Q4G1C9 344 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 ALG10BQ5I7T1 473 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 ELFN2Q5R3F8 820 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 C5orf46Q6UWT4 87 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 CARM1Q86X55 608 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 MEX3DQ86XN8 651 aaKnown RBP14.08□□□□□ -0.16
LIG1-205ENST00000593425 UEVLDQ8IX04 471 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 CCDC36Q8IYA8 594 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 C20orf196Q8IYI0 205 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 C10orf111Q8N326 155 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.08□□□□□ -0.16
LIG1-205ENST00000593425 ADPRHL1Q8NDY3 354 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 IL17RDQ8NFM7 739 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 MGARPQ8TDB4 240 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 SLC41A3Q96GZ6 507 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 MED29Q9NX70 200 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 ZNF224Q9NZL3 707 aa14.08□□□□□ -0.16
LIG1-205ENST00000593425 A0A087WUJ7 227 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 TMEM120BA0PK00 339 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 SLCO1B7G3V0H7 640 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 M0R233 179 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 UBDO15205 165 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 TPST1O60507 370 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 HPXP02790 462 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 BGLAPP02818 100 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 CD79AP11912 226 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 ZNF35P13682 527 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 ETS2P15036 469 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 NQO1P15559 274 aaKnown RBP14.07□□□□□ -0.16
LIG1-205ENST00000593425 TCN1P20061 433 aaPredicted RBP14.07□□□□□ -0.16
LIG1-205ENST00000593425 AQP5P55064 265 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 PIGFQ07326 219 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 FADDQ13158 208 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 ZNF813Q6ZN06 617 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 LRP11Q86VZ4 500 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 NFKBIDQ8NI38 313 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 TXNDC15Q96J42 360 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 SYT3Q9BQG1 590 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 PARD6BQ9BYG5 372 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 NARFLQ9H6Q4 476 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 SLC25A37Q9NYZ2 338 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 MYEF2Q9P2K5 600 aaKnown RBP14.07□□□□□ -0.16
LIG1-205ENST00000593425 REV1Q9UBZ9 1251 aa14.07□□□□□ -0.16
LIG1-205ENST00000593425 C5orf58C9J3I9 102 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 FAM157AC9JC47 383 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 LRRN3E7EW58 273 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 SYNGR3O43761 229 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 VENTXO95231 258 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 ARAFP10398 606 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 B4GALT1P15291 398 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 COL8A2P25067 703 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 GLRXP35754 106 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 ALDH3B1P43353 468 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 PTDSS1P48651 473 aaKnown RBP14.06□□□□□ -0.16
LIG1-205ENST00000593425 EVX1P49640 407 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 SEC24CP53992 1094 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 CAMK2DQ13557 499 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 MFSD13AQ14CX5 517 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 MAD2L1BPQ15013 274 aaPredicted RBP14.06□□□□□ -0.16
LIG1-205ENST00000593425 NHLRC1Q6VVB1 395 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 ZNF627Q7L945 461 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 NET1Q7Z628 596 aaPredicted RBP14.06□□□□□ -0.16
LIG1-205ENST00000593425 MSRB3Q8IXL7 192 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 MIER2Q8N344 545 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 CLDND2Q8NHS1 167 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 DNAJA4Q8WW22 397 aaPredicted RBP14.06□□□□□ -0.16
LIG1-205ENST00000593425 MOGAT1Q96PD6 335 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 WFDC6Q9BQY6 131 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 RAD21L1Q9H4I0 556 aa14.06□□□□□ -0.16
LIG1-205ENST00000593425 WNT9BO14905 357 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 GPR6P46095 362 aaPredicted RBP14.05□□□□□ -0.16
LIG1-205ENST00000593425 GIPRP48546 466 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 FXNQ16595 210 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 TRMT5Q32P41 509 aaKnown RBP14.05□□□□□ -0.16
LIG1-205ENST00000593425 FAM91A1Q658Y4 838 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 ULK3Q6PHR2 472 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 DHRS4L2Q6PKH6 230 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 UGT2A3Q6UWM9 527 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms