RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CRNNQ9UBG3 495 aaPredicted RBP11.5□□□□□ -0.57
H3F3B-213ENST00000593254 MOKQ9UQ07 419 aa11.5□□□□□ -0.57
H3F3B-213ENST00000593254 ATP23Q9Y6H3 246 aa11.5□□□□□ -0.57
H3F3B-213ENST00000593254 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 H7C417 338 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 M0R3H8 397 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 FBP2O00757 339 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 AKAP8O43823 692 aaKnown RBP11.49□□□□□ -0.57
H3F3B-213ENST00000593254 HPRP00739 348 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 CBLP22681 906 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
H3F3B-213ENST00000593254 GZMMP51124 257 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 UBE2NP61088 152 aaKnown RBP11.49□□□□□ -0.57
H3F3B-213ENST00000593254 C1DQ13901 141 aaKnown RBP11.49□□□□□ -0.57
H3F3B-213ENST00000593254 NPTX1Q15818 432 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 TRMT5Q32P41 509 aaKnown RBP11.49□□□□□ -0.57
H3F3B-213ENST00000593254 C3orf36Q3SXR2 165 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 NHLRC1Q6VVB1 395 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 LINC00114Q6XXX2 140 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
H3F3B-213ENST00000593254 TMEM123Q8N131 208 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 OR6T1Q8NGN1 323 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 OR10A6Q8NH74 314 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 RNF217Q8TC41 542 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 MOGAT1Q96PD6 335 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 OR2M2Q96R28 347 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 MCHR1Q99705 422 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 TGP01266 2768 aa11.49□□□□□ -0.57
H3F3B-213ENST00000593254 A0A096LPE4 126 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 A0A1W2PPZ6 126 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 FXYD1O00168 92 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 CHP2O43745 196 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 SSX4O60224 188 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 IGKV3-15P01624 115 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 HLA-DOBP13765 273 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 NQO1P15559 274 aaKnown RBP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 CD247P20963 164 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 CRYBA2P53672 197 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 PUDPQ08623 228 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 VMACQ2NL98 169 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 CEACAM16Q2WEN9 425 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 TMEM249Q2WGJ8 235 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 INTS11Q5TA45 600 aaKnown RBP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 NANOGP8Q6NSW7 305 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 UEVLDQ8IX04 471 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 GPR137CQ8N3F9 429 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 FAM169BQ8N8A8 192 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 PIK3C3Q8NEB9 887 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 OR4D11Q8NGI4 311 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 TAMM41Q96BW9 452 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 ZNF837Q96EG3 531 aaPredicted RBP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 KATNB1Q9BVA0 655 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 ASPNQ9BXN1 380 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 NANOGQ9H9S0 305 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 CRLF2Q9HC73 371 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 MOV10Q9HCE1 1003 aaKnown RBP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 MED4Q9NPJ6 270 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 MRPL39Q9NYK5 338 aaKnown RBP11.48□□□□□ -0.57
H3F3B-213ENST00000593254 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
H3F3B-213ENST00000593254 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CPSF4LA6NMK7 179 aaKnown RBP11.47□□□□□ -0.57
H3F3B-213ENST00000593254 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
H3F3B-213ENST00000593254 LRRN3E7EW58 273 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 LYPD3O95274 346 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 MT-ATP6P00846 226 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CRYAAP02489 173 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 THY1P04216 161 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CECR9P0C854 216 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 NUDT6P53370 316 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 TUBA1BP68363 451 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 TUBA4AP68366 448 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 VLDLRP98155 873 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 IL1RL1Q01638 556 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 NAAAQ02083 359 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 POU3F1Q03052 451 aaPredicted RBP11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CHRNB3Q05901 458 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 PMS2P3Q13401 168 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CYLC2Q14093 348 aaPredicted RBP11.47□□□□□ -0.57
H3F3B-213ENST00000593254 RAB35Q15286 201 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 COQ5Q5HYK3 327 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 ENTPD8Q5MY95 495 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CGB2Q6NT52 195 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 WDR88Q6ZMY6 472 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 CCDC80Q76M96 950 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 TSPYL5Q86VY4 417 aaPredicted RBP11.47□□□□□ -0.57
H3F3B-213ENST00000593254 RBM45Q8IUH3 476 aaKnown RBP11.47□□□□□ -0.57
H3F3B-213ENST00000593254 OR10H5Q8NGA6 315 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 ADAMTS16Q8TE57 1224 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 LRR1Q96L50 414 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 TNFRSF13CQ96RJ3 184 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 KCNS3Q9BQ31 491 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 PCDHAC1Q9H158 963 aa11.47□□□□□ -0.57
H3F3B-213ENST00000593254 FGFR1OP2Q9NVK5 253 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms