RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZNF542PQ5EBM4 170 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PAQR6Q6TCH4 344 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ARCQ7LC44 396 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PAGE2Q7Z2X7 111 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ABHD12BQ7Z5M8 362 aaPredicted RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PRUNE1Q86TP1 453 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 TBC1D10CQ8IV04 446 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 MLKLQ8NB16 471 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 OR7G2Q8NG99 324 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ESR2Q92731 530 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 LHX4Q969G2 390 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 HPDLQ96IR7 371 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 VSTM2LQ96N03 204 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 RIT2Q99578 217 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 IL12RB2Q99665 862 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 TMEM246Q9BRR3 403 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 HINT2Q9BX68 163 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ILKAPQ9H0C8 392 aaPredicted RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 NARFLQ9H6Q4 476 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ADAP2Q9NPF8 381 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 MRPL40Q9NQ50 206 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PXMP2Q9NR77 195 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 LYARQ9NX58 379 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 P2RX2Q9UBL9 471 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PITPNC1Q9UKF7 332 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 RAB23Q9ULC3 237 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ABCG2Q9UNQ0 655 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 WDR45Q9Y484 360 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CFAP46Q8IYW2 2715 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PSME4Q14997 1843 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 RPAP1Q9BWH6 1393 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 MROH7-TTC4A0A0A0MT08 1334 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 AK9Q5TCS8 1911 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 A0A087WZ39 114 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 PPIAL4CA0A0B4J2A2 164 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 FRG2CA6NGY1 282 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 ERI2A8K979 691 aaKnown RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 NPIPB9F8W1W9 429 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 ARPC1BO15143 372 aaKnown RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 RS1O15537 224 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 OR1F1O43749 312 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TPST2O60704 377 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 STSP08842 583 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 NUDT17P0C025 328 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 PPIAL4GP0DN37 164 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CD59P13987 128 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 IDO1P14902 403 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 EIF2S2P20042 333 aaKnown RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CNR1P21554 472 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 MMP11P24347 488 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CRYBB2P43320 205 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CSNK1DP48730 415 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TGM4P49221 684 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 KCNK10P57789 538 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 UBE2G2P60604 165 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 IRF8Q02556 426 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CHRNB3Q05901 458 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 MSLNQ13421 630 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CAPRIN1Q14444 709 aaKnown RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 SNAI3Q3KNW1 292 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 FAM106AQ4KMX7 169 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TIGD3Q6B0B8 471 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF770Q6IQ21 691 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 KCNIP4Q6PIL6 250 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 GPR141Q7Z602 305 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CCDC185Q8N715 623 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TMEM105Q8N8V8 129 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CCDC112Q8NEF3 446 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 OR10H4Q8NGA5 316 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 RPLP0P6Q8NHW5 317 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 C11orf45Q8TAV5 145 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 HTR3CQ8WXA8 447 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 GTF2H4Q92759 462 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 GLYATL1Q969I3 302 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CCDC127Q96BQ5 260 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 RAB39BQ96DA2 213 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 SLC45A3Q96JT2 553 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF578Q96N58 590 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TGM7Q96PF1 710 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TSSK2Q96PF2 358 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 LGMNQ99538 433 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CTRCQ99895 268 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 OVOL2Q9BRP0 275 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TTYH2Q9BSA4 534 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 LRRC2Q9BYS8 371 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TRIM9Q9C026 710 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 C10orf88Q9H8K7 445 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 PANK3Q9H999 370 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMAD4-216ENST00000593223 TAS2R7Q9NYW3 318 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 NLGN3Q9NZ94 848 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 CLEC2DQ9UHP7 191 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 MYO9AB2RTY4 2548 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 PLXNB2O15031 1838 aa4.04□□□□□ -1.76
SMAD4-216ENST00000593223 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 IBTKQ9P2D0 1353 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 CNOT1A5YKK6 2376 aaKnown RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 LOC105371267A0A1B0GV96 52 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 IQCMA0A1B0GVH7 501 aa4.03□□□□□ -1.76
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