RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TMEM229BQ8NBD8 167 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TP53I13Q8NBR0 393 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR1M1Q8NGA1 313 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR6K3Q8NGY3 331 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR6N1Q8NGY5 312 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR4Q3Q8NH05 313 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ASB12Q8WXK4 309 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 AUTS2Q8WXX7 1259 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HERVK_113Q902F9 699 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RSC1A1Q92681 617 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC38A3Q99624 504 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CMKLR1Q99788 373 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 PLA2G12AQ9BZM1 189 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 B3GAT2Q9NPZ5 323 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CLDND1Q9NY35 253 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OBP2AQ9NY56 170 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 EPHA6Q9UF33 1036 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 IL20RAQ9UHF4 553 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FBXL4Q9UKA2 621 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RAB22AQ9UL26 194 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SF3B6Q9Y3B4 125 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 PRKAB1Q9Y478 270 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ATG4BQ9Y4P1 393 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DOCK4Q8N1I0 1966 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 A0A1W2PR48 441 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC22A23A1A5C7 686 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR6C65A6NJZ3 312 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GRXCR1A8MXD5 290 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 PRSS44E7EML9 344 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 E9PQ18 207 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 YY2O15391 372 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 MT-ATP6P00846 226 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CXCL10P02778 98 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FCER2P06734 321 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SPARCP09486 303 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HTR2CP28335 458 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ADH7P40394 386 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 BCL6P41182 706 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CX3CR1P49238 355 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RAB5CP51148 216 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TAS2R46P59540 309 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 BPIFB3P59826 476 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SIM1P81133 766 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 KLF9Q13886 244 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 CBFBQ13951 182 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GPR18Q14330 331 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TCEAL5Q5H9L2 206 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ARHGAP40Q5TG30 622 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FAHD2BQ6P2I3 314 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 CHRDL2Q6WN34 429 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ADIPOR2Q86V24 386 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SIRT6Q8N6T7 355 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ARIH2OSQ8N7S6 290 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DTX3Q8N9I9 347 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR8D4Q8NGM9 314 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CD99L2Q8TCZ2 262 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DCUN1D4Q92564 292 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SMARCD2Q92925 531 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC35A4Q96G79 324 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FAHD2AQ96GK7 314 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZNF285Q96NJ3 590 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TNFRSF13CQ96RJ3 184 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC22A12Q96S37 553 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 INSM2Q96T92 566 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 SOSTQ9BQB4 213 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SEC22CQ9BRL7 303 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HCAR1Q9BXC0 346 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC17A9Q9BYT1 436 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ALX4Q9H161 411 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A18Q9H1K4 315 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 IFT22Q9H7X7 185 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 IL21Q9HBE4 155 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 UBQLN4Q9NRR5 601 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KLF2Q9Y5W3 355 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 POMT1Q9Y6A1 747 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 MGAMO43451 1857 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KIR2DS5A0A0G2JLQ3 304 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 A0A0G2JNG1 304 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR6C74A6NCV1 312 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 MCRIP1C9JLW8 97 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 H7C417 338 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KIR2DS3K7RE56 304 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 M0R036 132 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 PIP5K1CO60331 668 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GLSO94925 669 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 BPNT1O95861 308 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DCNP07585 359 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 CHRM2P08172 466 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GUSBP08236 651 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RAC2P15153 192 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 P2RX1P51575 399 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KIAA1024LP59773 190 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RPL19P84098 196 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZNF345Q14585 488 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HLXQ14774 488 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 KIR2DS5Q14953 304 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZNF77Q15935 545 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 PAN3Q58A45 887 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZC3H14Q6PJT7 736 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms