RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 SAMD8Q96LT4 415 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 ZNF385AQ96PM9 386 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 POLDIP3Q9BY77 421 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 EGLN3Q9H6Z9 239 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 C12orf49Q9H741 205 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 SMURF2Q9HAU4 748 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 PAPOLBQ9NRJ5 636 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 TBC1D23Q9NUY8 699 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 PROCRQ9UNN8 238 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ZNF726A6NNF4 738 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 EI24O14681 340 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 MGRN1O60291 552 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 TNFSF13O75888 250 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
VMP1-210ENST00000589823 SOX14O95416 240 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 CD14P08571 375 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 OSMP13725 252 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 IFNGR1P15260 489 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 BMP5P22003 454 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 IGFBP5P24593 272 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 SLC34A1Q06495 639 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 TOP3AQ13472 1001 aaPredicted RBP12.09□□□□□ -0.47
VMP1-210ENST00000589823 DAG1Q14118 895 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 MELKQ14680 651 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ACKR1Q16570 336 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ANKRD34AQ69YU3 496 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 KDM4DQ6B0I6 523 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 THSD4Q6ZMP0 1018 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 DPY19L2P2Q6ZN68 376 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ZBTB49Q6ZSB9 765 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 KIF18BQ86Y91 864 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 CBR4Q8N4T8 237 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 LRRC75AQ8NAA5 344 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 STARD4Q96DR4 205 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ADAD1Q96M93 576 aaKnown RBP12.09□□□□□ -0.47
VMP1-210ENST00000589823 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
VMP1-210ENST00000589823 KATNB1Q9BVA0 655 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 IFT27Q9BW83 186 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 TXNIPQ9H3M7 391 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 PIGMQ9H3S5 423 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 MED29Q9NX70 200 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 IL20Q9NYY1 176 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 IL20RAQ9UHF4 553 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ENOPH1Q9UHY7 261 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 RCE1Q9Y256 329 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 ORC6Q9Y5N6 252 aa12.09□□□□□ -0.47
VMP1-210ENST00000589823 SLC35F4A4IF30 521 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 EEF1E1-BLOC1S5C9J1V9 151 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 EEF1E1O43324 174 aaKnown RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 SLC43A1O75387 559 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 AGFG2O95081 481 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 IGHMP01871 453 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 CD8BP10966 210 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 CDH2P19022 906 aaPredicted RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 POU1F1P28069 291 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 BIDP55957 195 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 RPL27P61353 136 aaKnown RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 ERVK-25P63136 954 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 PPP2R2BQ00005 443 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 RIPK1Q13546 671 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 FAM205BPQ63HN1 556 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 BTLAQ7Z6A9 289 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 PARP8Q8N3A8 854 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 OR6X1Q8NH79 312 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 MAGEE2Q8TD90 523 aaPredicted RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 APH1AQ96BI3 265 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 TXNDC15Q96J42 360 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 EMC6Q9BV81 110 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 TSSK6Q9BXA6 273 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 NRIP3Q9NQ35 241 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 GRHPRQ9UBQ7 328 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 REV1Q9UBZ9 1251 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 ZNF346Q9UL40 294 aaKnown RBP12.08□□□□□ -0.48
VMP1-210ENST00000589823 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
VMP1-210ENST00000589823 A6NIZ1 184 aa12.07□□□□□ -0.48
VMP1-210ENST00000589823 SOCS2O14508 198 aa12.07□□□□□ -0.48
VMP1-210ENST00000589823 ZG16O60844 167 aa12.07□□□□□ -0.48
VMP1-210ENST00000589823 KRT33AO76009 404 aa12.07□□□□□ -0.48
VMP1-210ENST00000589823 ATP6V1G2O95670 118 aa12.07□□□□□ -0.48
VMP1-210ENST00000589823 PPP1R3DO95685 299 aa12.07□□□□□ -0.48
VMP1-210ENST00000589823 APEHP13798 732 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms