RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 GIPC3Q8TF64 312 aa16.8■□□□□ 0.28
CLPTM1-209ENST00000588855 APH1AQ96BI3 265 aa16.8■□□□□ 0.28
CLPTM1-209ENST00000588855 TXNDC15Q96J42 360 aa16.8■□□□□ 0.28
CLPTM1-209ENST00000588855 INIPQ9NRY2 104 aa16.8■□□□□ 0.28
CLPTM1-209ENST00000588855 SIGLEC7Q9Y286 467 aa16.8■□□□□ 0.28
CLPTM1-209ENST00000588855 ALPK2Q86TB3 2170 aa16.8■□□□□ 0.28
CLPTM1-209ENST00000588855 ICE1Q9Y2F5 2266 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 PTP4A3O75365 173 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 CLDN1O95832 211 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 IFNGR1P15260 489 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 GRNP28799 593 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 FXYD6P3P58550 94 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 TSPAN31Q12999 210 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 MELKQ14680 651 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 FBXL19-AS1Q494R0 122 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 ANKDD1AQ495B1 522 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 SLC35D2Q76EJ3 337 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 STK32CQ86UX6 486 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 IGFN1Q86VF2 1251 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 LRRC75AQ8NAA5 344 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 EMC6Q9BV81 110 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 RBM24Q9BX46 236 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 SEMA6AQ9H2E6 1030 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 S100A14Q9HCY8 104 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 PARPBPQ9NWS1 579 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 PDP1Q9P0J1 537 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 RCE1Q9Y256 329 aa16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 MAGED1Q9Y5V3 778 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-209ENST00000588855 MCIDASD6RGH6 385 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 ZNF432O94892 652 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 SHQ1Q6PI26 577 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 FANK1Q8TC84 345 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 GTPBP3Q969Y2 492 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 FEVQ99581 238 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 PKP2Q99959 881 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 GALNT8Q9NY28 637 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 IL20RAQ9UHF4 553 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 MGAT4BQ9UQ53 548 aa16.78■□□□□ 0.28
CLPTM1-209ENST00000588855 A0A1W2PRG6 482 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 SLC35F4A4IF30 521 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 ARRDC5A6NEK1 342 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 C19orf84I3L1E1 186 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 AKAP8O43823 692 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 PRKACGP22612 351 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 BIDP55957 195 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 PRPS1P60891 318 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 LGALS3BPQ08380 585 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 TSPO2Q5TGU0 170 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 THSD4Q6ZMP0 1018 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 BEND4Q6ZU67 534 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 OR5K1Q8NHB7 308 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 OR2M2Q96R28 347 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 NIPSNAP1Q9BPW8 284 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 BDH2Q9BUT1 245 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 DGCR6LQ9BY27 220 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 ENKD1Q9H0I2 346 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 SLCO5A1Q9H2Y9 848 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 NPDC1Q9NQX5 325 aaPredicted RBP16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 SLC7A10Q9NS82 523 aa16.77■□□□□ 0.28
CLPTM1-209ENST00000588855 NDUFB2O95178 105 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 RPL4P36578 427 aaKnown RBP16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 CTXN1P60606 82 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 TOP3AQ13472 1001 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 ACKR1Q16570 336 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 CARD17Q5XLA6 110 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 ANKRD34AQ69YU3 496 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 SMARCD3Q6STE5 483 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF620Q6ZNG0 422 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 TMEM123Q8N131 208 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 GABRG1Q8N1C3 465 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 UBE2J2Q8N2K1 259 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 STMN2Q93045 179 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 RNASE6Q93091 150 aaKnown RBP16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 NRBF2Q96F24 287 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 CENPNQ96H22 339 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 KATNB1Q9BVA0 655 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 OR52D1Q9H346 318 aa16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 KLF2Q9Y5W3 355 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-209ENST00000588855 PRSS44E7EML9 344 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 BCL10O95999 233 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ADAP00813 363 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF23P17027 643 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ARHGDIAP52565 204 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 FAM27E3Q08E93 113 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 CAMK2DQ13557 499 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 FBXW9Q5XUX1 488 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 Q6ZT83 130 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 KIF18BQ86Y91 864 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ASB10Q8WXI3 467 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ALKBH3Q96Q83 286 aaPredicted RBP16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 TSPAN32Q96QS1 320 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 POLDIP3Q9BY77 421 aaKnown RBP16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 EGLN3Q9H6Z9 239 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 MALT1Q9UDY8 824 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ADAM18Q9Y3Q7 739 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 PTPN13Q12923 2485 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 NPIPB13A6NJU9 1138 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 NPIPB4C9JG80 1138 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 SLC43A1O75387 559 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms