RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 NELFAQ9H3P2 528 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 CRLF2Q9HC73 371 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 B3GAT2Q9NPZ5 323 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-208ENST00000588692 SLC7A7Q9UM01 511 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 ATP23Q9Y6H3 246 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF99A8MXY4 864 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-208ENST00000588692 ATP6V1G2-DDX39BF2Z307 99 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 PLPP3O14495 311 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
DDX39A-208ENST00000588692 CCDC22O60826 627 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 LYPD3O95274 346 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 CRYAAP02489 173 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 THY1P04216 161 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 BMP4P12644 408 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 PTNP21246 168 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 AHCYP23526 432 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 FABP6P51161 128 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 ARF1P84077 181 aaKnown RBP12.6□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF74Q16587 644 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 CEACAM16Q2WEN9 425 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 KRTAP21-3Q3LHN1 58 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 C11orf71Q6IPW1 123 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 WDR88Q6ZMY6 472 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 CARM1Q86X55 608 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 C20orf196Q8IYI0 205 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 OR2T12Q8NG77 320 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 POM121Q96HA1 1249 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 ADAD1Q96M93 576 aaKnown RBP12.6□□□□□ -0.39
DDX39A-208ENST00000588692 KATNB1Q9BVA0 655 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 NANSQ9NR45 359 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 ARMCX1Q9P291 453 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 SH3GLB1Q9Y371 365 aa12.6□□□□□ -0.39
DDX39A-208ENST00000588692 A0A096LPE4 126 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 SLC35F4A4IF30 521 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF726A6NNF4 738 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 LRRN3E7EW58 273 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 OR6A2O95222 327 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 IGKV3-15P01624 115 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 ADORA3P0DMS8 318 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 APOBEC3AP31941 199 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-208ENST00000588692 RBM34P42696 430 aaKnown RBP12.59□□□□□ -0.39
DDX39A-208ENST00000588692 NHLRC1Q6VVB1 395 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-208ENST00000588692 RCN3Q96D15 328 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 CACNG6Q9BXT2 260 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 MED29Q9NX70 200 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 MOKQ9UQ07 419 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 ZANQ9Y493 2812 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 H7C417 338 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 M0R3G1 203 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 OR5F1O95221 314 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 LY6G6DO95868 133 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 CH25HO95992 272 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 IGLV1-44P01699 117 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 THRBP10828 461 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 HOXB4P17483 251 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-208ENST00000588692 KDELR2P33947 212 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 CHRNB3Q05901 458 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 ZP4Q12836 540 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 TNK1Q13470 666 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 CARD17Q5XLA6 110 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 OR6N1Q8NGY5 312 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 PRSS27Q9BQR3 290 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
DDX39A-208ENST00000588692 ELOVL7A1L3X0 281 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 KPNA4O00629 521 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-208ENST00000588692 IGF2P01344 180 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 HIST1H2ABP04908 130 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 ASAH2BP0C7U1 165 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 CECR9P0C854 216 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 COX4I1P13073 169 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 CBR1P16152 277 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 ARR3P36575 388 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 ACVR1BP36896 505 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 TAS2R41P59536 307 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 NAAAQ02083 359 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-208ENST00000588692 CYBRD1Q53TN4 286 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 DEF8Q6ZN54 512 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 HIST3H2AQ7L7L0 130 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 NANOGNBQ7Z5D8 188 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 HIST1H2ACQ93077 130 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 ZNF837Q96EG3 531 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-208ENST00000588692 TXNDC15Q96J42 360 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 ULBP2Q9BZM5 246 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 GDF2Q9UK05 429 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-208ENST00000588692 USP22Q9UPT9 525 aa12.58□□□□□ -0.4
DDX39A-208ENST00000588692 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
DDX39A-208ENST00000588692 C11orf98E9PRG8 122 aa12.57□□□□□ -0.4
DDX39A-208ENST00000588692 NDUFS7O75251 213 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms