RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, human

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-210	ENST00000588458	SRP14	P37108	136 aa	Known RBP	11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	CHN2	P52757	468 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	AQP5	P55064	265 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	STX1B	P61266	288 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	NCALD	P61601	193 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	CDK6	Q00534	326 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	SNTB2	Q13425	540 aa	Known RBP	11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	MS4A18	Q3C1V0	323 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	PHYHD1	Q5SRE7	291 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	GCNT6	Q5T4J0	391 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	REEP3	Q6NUK4	255 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	ULK3	Q6PHR2	472 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	C6orf89	Q6UWU4	347 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	KRT73	Q86Y46	540 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	CDK20	Q8IZL9	346 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	ZNF786	Q8N393	782 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	C10orf53	Q8N6V4	93 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	LSMEM1	Q8N8F7	131 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	SLC47A1	Q96FL8	570 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	SNX18	Q96RF0	628 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	SPATA5L1	Q9BVQ7	753 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	TMEM27	Q9HBJ8	222 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	SLC13A4	Q9UKG4	626 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	POFUT2	Q9Y2G5	429 aa		11.12	□□□□□ -0.63
ABCA8-210	ENST00000588458	IGKV1D-42	A0A075B6H8	117 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	LOC102725191	A0A1B0GVB3	256 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	ZNF726	A6NNF4	738 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	LYNX1	G3V0Z9	82 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	TRAF3IP2	O43734	574 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	LILRA1	O75019	489 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	HPR	P00739	348 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	LYNX1	P0DP58	116 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	HLA-DOB	P13765	273 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	NR4A1	P22736	598 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	AHCY	P23526	432 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	IL2RG	P31785	369 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	SLC18A1	P54219	525 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	PMS2P3	Q13401	168 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	CAMK2D	Q13557	499 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	MFSD13A	Q14CX5	517 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	GLIPR1L2	Q4G1C9	344 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	ZNF813	Q6ZN06	617 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	COMTD1	Q86VU5	262 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	C20orf196	Q8IYI0	205 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	TMEM123	Q8N131	208 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	LINC01356	Q8N9X3	169 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	OR6N1	Q8NGY5	312 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	TXNDC15	Q96J42	360 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	EPYC	Q99645	322 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	ASPN	Q9BXN1	380 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	TPK1	Q9H3S4	243 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	NOX3	Q9HBY0	568 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	B3GAT2	Q9NPZ5	323 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	SLAMF8	Q9P0V8	285 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	KLHL14	Q9P2G3	628 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	SPEF1	Q9Y4P9	236 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	CORIN	Q9Y5Q5	1042 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	NOX1	Q9Y5S8	564 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	USH1C	Q9Y6N9	552 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	SVEP1	Q4LDE5	3571 aa		11.11	□□□□□ -0.63
ABCA8-210	ENST00000588458	NBEAL1	Q6ZS30	2694 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458		A0A087WUJ7	227 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	SERPINI2	O75830	405 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	TACSTD2	P09758	323 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	ARAF	P10398	606 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	TCN1	P20061	433 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	SLC6A2	P23975	617 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	AQP1	P29972	269 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	RGS8	P57771	180 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	POU3F1	Q03052	451 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	OR1Q1	Q15612	314 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	GSG1	Q2KHT4	349 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	TRMT5	Q32P41	509 aa	Known RBP	11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	FAM91A1	Q658Y4	838 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	DHRS4L2	Q6PKH6	230 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	EPGN	Q6UW88	154 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	HPS1	Q92902	700 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	SPDL1	Q96EA4	605 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	LRR1	Q96L50	414 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	ZNF607	Q96SK3	696 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	MED29	Q9NX70	200 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	B3GNT2	Q9NY97	397 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	SLC25A37	Q9NYZ2	338 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	CCDC167	Q9P0B6	97 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	REV1	Q9UBZ9	1251 aa		11.1	□□□□□ -0.63
ABCA8-210	ENST00000588458	PRORSD1P	A6NEY8	169 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	POLR3G	O15318	223 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	SYNGR3	O43761	229 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	FZD7	O75084	574 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	SERPINB7	O75635	380 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	BGLAP	P02818	100 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	IGFBP1	P08833	259 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	B4GALT1	P15291	398 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	PPIB	P23284	216 aa	Known RBP	11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	PTDSS1	P48651	473 aa	Known RBP	11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	PUDP	Q08623	228 aa		11.09	□□□□□ -0.63
ABCA8-210	ENST00000588458	RIN1	Q13671	783 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms