RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SGTBQ96EQ0 304 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 HS6ST2Q96MM7 605 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 EMC6Q9BV81 110 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 CXXC4Q9H2H0 198 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 B3GAT2Q9NPZ5 323 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 MEPEQ9NQ76 525 aaPredicted RBP13□□□□□ -0.33
ATG4D-207ENST00000587256 RPS6KA6Q9UK32 745 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 MED31Q9Y3C7 131 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 SLC35F4A4IF30 521 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF726A6NNF4 738 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 M0R3G1 203 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 SMPD2O60906 423 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 OR7A10O76100 309 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 TCN1P20061 433 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-207ENST00000587256 PTAFRP25105 342 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 UBE2NP61088 152 aaKnown RBP12.99□□□□□ -0.33
ATG4D-207ENST00000587256 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 SAMD4BQ5PRF9 694 aaKnown RBP12.99□□□□□ -0.33
ATG4D-207ENST00000587256 GLYATQ6IB77 296 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 SLC46A3Q7Z3Q1 461 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 CYP4Z1Q86W10 505 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 WDR31Q8NA23 367 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 FAM156AQ8NDB6 213 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 RBM15BQ8NDT2 890 aaKnown RBP12.99□□□□□ -0.33
ATG4D-207ENST00000587256 OR6N1Q8NGY5 312 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 TMEM171Q8WVE6 324 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 FNDC11Q9BVV2 318 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 GPR35Q9HC97 309 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 RHCGQ9UBD6 479 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 A4GNTQ9UNA3 340 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 SAMD4AQ9UPU9 718 aaKnown RBP12.99□□□□□ -0.33
ATG4D-207ENST00000587256 SNX13Q9Y5W8 968 aa12.99□□□□□ -0.33
ATG4D-207ENST00000587256 RAI1Q7Z5J4 1906 aaPredicted RBP12.98□□□□□ -0.33
ATG4D-207ENST00000587256 A0A096LPE4 126 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 A0A1W2PPZ6 126 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 BLOC1S5-TXNDC5H3BN57 136 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 J3KTA2 159 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 PIP5K1CO60331 668 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 ASAH2BP0C7U1 165 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 IFNGR1P15260 489 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 MNAT1P51948 309 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 BIDP55957 195 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 ARF1P84077 181 aaKnown RBP12.98□□□□□ -0.33
ATG4D-207ENST00000587256 SPOCK1Q08629 439 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 CAMK2DQ13557 499 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 TRAM2Q15035 370 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
ATG4D-207ENST00000587256 C1QTNF12Q5T7M4 302 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 ANKRD16Q6P6B7 361 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 SLC22A25Q6T423 547 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 SLC35D2Q76EJ3 337 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 C20orf196Q8IYI0 205 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 NEUROG1Q92886 237 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 TXNDC15Q96J42 360 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 PIP5K1AQ99755 562 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 ULBP2Q9BZM5 246 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 OBP2BQ9NPH6 170 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 C20orf141Q9NUB4 165 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 MAGEL2Q9UJ55 1249 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 MGAT4BQ9UQ53 548 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 V9GYQ6 96 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 CELSR1Q9NYQ6 3014 aa12.98□□□□□ -0.33
ATG4D-207ENST00000587256 MCIDASD6RGH6 385 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 RPL36A-HNRNPH2H7BZ11 118 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 SEC14L2O76054 403 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 IGF2P01344 180 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 IFI30P13284 250 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 HSD17B1P14061 328 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 FUT1P19526 365 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 CD40P25942 277 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 RPL18Q07020 188 aaKnown RBP12.97□□□□□ -0.33
ATG4D-207ENST00000587256 ZP4Q12836 540 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 MELKQ14680 651 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 KRT72Q14CN4 511 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 DEFB107AQ8IZN7 70 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 DEPDC4Q8N2C3 294 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 FITM2Q8N6M3 262 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 BCL2L2Q92843 193 aaPredicted RBP12.97□□□□□ -0.33
ATG4D-207ENST00000587256 RADILQ96JH8 1075 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 ADAD1Q96M93 576 aaKnown RBP12.97□□□□□ -0.33
ATG4D-207ENST00000587256 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 CXorf56Q9H5V9 222 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 TAS2R5Q9NYW4 299 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 LAMP3Q9UQV4 416 aa12.97□□□□□ -0.33
ATG4D-207ENST00000587256 PRRC2AP48634 2157 aaKnown RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 A0A1W2PRG6 482 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 SHISA9B4DS77 424 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 SAGP10523 405 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 CAPZA2P47755 286 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 TUBA1BP68363 451 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 TUBA4AP68366 448 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 NKX6-1P78426 367 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 PHYHD1Q5SRE7 291 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms