RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ADPRHL1Q8NDY3 354 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 OR6S1Q8NH40 331 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 RNF217Q8TC41 542 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 MAGEE2Q8TD90 523 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-206ENST00000584112 TSPEARQ8WU66 669 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 CKAP2Q8WWK9 683 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 TAAR8Q969N4 342 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 SLC38A2Q96QD8 506 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 CPPED1Q9BRF8 314 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-206ENST00000584112 IKZF5Q9H5V7 419 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 NDUFAF1Q9Y375 327 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 PMF1-BGLAPU3KQ54 211 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 A0A0B4J2E0 115 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 LOC102725191A0A1B0GVB3 256 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 A0A1B0GX12 115 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ATP6V1G2-DDX39BF2Z307 99 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 RPL36A-HNRNPH2H7BZ11 118 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 M0R082 166 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF432O94892 652 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 CRYAAP02489 173 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 HNF1AP20823 631 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 HTR2AP28223 471 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 AQP1P29972 269 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 GRPRP30550 384 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 IL1RL1Q01638 556 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ROR2Q01974 943 aaKnown RBP9.68□□□□□ -0.86
CCDC47-206ENST00000584112 RBBP4Q09028 425 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 CYP51A1Q16850 503 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 C3orf36Q3SXR2 165 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 RUNDC3AQ59EK9 446 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ANKRD16Q6P6B7 361 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 DLEU7Q6UYE1 221 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 H1FNTQ75WM6 255 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-206ENST00000584112 SLC30A8Q8IWU4 369 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 KDM8Q8N371 416 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 GPR137CQ8N3F9 429 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 DPP10Q8N608 796 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 PIK3C3Q8NEB9 887 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF417Q8TAU3 575 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 BCL2L2Q92843 193 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF587Q96SQ5 575 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 KATNB1Q9BVA0 655 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 KLHL14Q9P2G3 628 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 B3GAT1Q9P2W7 334 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 KCNS2Q9ULS6 477 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 MOKQ9UQ07 419 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 CORINQ9Y5Q5 1042 aa9.68□□□□□ -0.86
CCDC47-206ENST00000584112 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 A0A087WUJ7 227 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 IGHV1-18A0A0C4DH31 117 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 TPST1O60507 370 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 UPK3AO75631 287 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 MFN2O95140 757 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 VIMP08670 466 aaKnown RBP9.67□□□□□ -0.86
CCDC47-206ENST00000584112 CSF3P09919 207 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 NQO1P15559 274 aaKnown RBP9.67□□□□□ -0.86
CCDC47-206ENST00000584112 PCBP3P57721 371 aaKnown RBP9.67□□□□□ -0.86
CCDC47-206ENST00000584112 SNRPD2P62316 118 aaKnown RBP9.67□□□□□ -0.86
CCDC47-206ENST00000584112 LGALS3BPQ08380 585 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 OR1Q1Q15612 314 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 ADRM1Q16186 407 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 GLIPR1L2Q4G1C9 344 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 SHISA2Q6UWI4 295 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 LINGO2Q7L985 606 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 COMTD1Q86VU5 262 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 UEVLDQ8IX04 471 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 CCDC36Q8IYA8 594 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 FAM169BQ8N8A8 192 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 SCAIQ8N9R8 606 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 ZDHHC16Q969W1 377 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 ANKRD27Q96NW4 1050 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 CGREF1Q99674 301 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 TMEM43Q9BTV4 400 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 ASPNQ9BXN1 380 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 RSPO3Q9BXY4 272 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-206ENST00000584112 NPHS2Q9NP85 383 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 MRGBPQ9NV56 204 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 CRNNQ9UBG3 495 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-206ENST00000584112 SEC14L4Q9UDX3 406 aa9.67□□□□□ -0.86
CCDC47-206ENST00000584112 A0A096LPE4 126 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF99A8MXY4 864 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 TRAF3IP2O43734 574 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 FMO6PO60774 539 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 EDF1O60869 148 aaKnown RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 RGS9O75916 674 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 PDE5AO76074 875 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 IGKV3-15P01624 115 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 SLC25A16P16260 332 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 EFNA4P52798 201 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 ARF1P84077 181 aaKnown RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 NAAAQ02083 359 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 NFYCQ13952 458 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 INTS11Q5TA45 600 aaKnown RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 METTL21CQ5VZV1 264 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF613Q6PF04 617 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 PATL1Q86TB9 770 aaKnown RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 SNX32Q86XE0 403 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms