RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SPATA21Q7Z572 469 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 YTHDF3Q7Z739 585 aaKnown RBP8.65□□□□□ -1.02
SKA2-208ENST00000583927 LSRQ86X29 649 aaPredicted RBP8.65□□□□□ -1.02
SKA2-208ENST00000583927 CARM1Q86X55 608 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 SLC15A3Q8IY34 581 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 C20orf196Q8IYI0 205 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 GPR137CQ8N3F9 429 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 LIPHQ8WWY8 451 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 CMTM5Q96DZ9 223 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 TRMT61AQ96FX7 289 aaKnown RBP8.65□□□□□ -1.02
SKA2-208ENST00000583927 COX4I2Q96KJ9 171 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 ADAD1Q96M93 576 aaKnown RBP8.65□□□□□ -1.02
SKA2-208ENST00000583927 HS6ST2Q96MM7 605 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 ALKBH3Q96Q83 286 aaPredicted RBP8.65□□□□□ -1.02
SKA2-208ENST00000583927 DHRS9Q9BPW9 319 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 PRSS27Q9BQR3 290 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 GPR35Q9HC97 309 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 NANSQ9NR45 359 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 CMTM6Q9NX76 183 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 SLC7A7Q9UM01 511 aa8.65□□□□□ -1.02
SKA2-208ENST00000583927 HIVEP2P31629 2446 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 ZNF99A8MXY4 864 aaPredicted RBP8.64□□□□□ -1.03
SKA2-208ENST00000583927 CENPBD1B2RD01 187 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 SNX3O60493 162 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 IGLV1-44P01699 117 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 MT-ND1P03886 318 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 TTKP33981 857 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 ZNF83P51522 516 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 POU3F1Q03052 451 aaPredicted RBP8.64□□□□□ -1.03
SKA2-208ENST00000583927 LGALS3BPQ08380 585 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 CYBRD1Q53TN4 286 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 C9orf135Q5VTT2 229 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 AGAP6Q5VW22 663 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 C11orf71Q6IPW1 123 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 SLC22A25Q6T423 547 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 DNM1P46Q6ZS02 220 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 TREML1Q86YW5 311 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 POU5F2Q8N7G0 328 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 OR6X1Q8NH79 312 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 VANGL1Q8TAA9 524 aaPredicted RBP8.64□□□□□ -1.03
SKA2-208ENST00000583927 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 LZICQ8WZA0 190 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 NEUROG1Q92886 237 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 PERPQ96FX8 193 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 KATNB1Q9BVA0 655 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 NSRP1Q9H0G5 558 aaKnown RBP8.64□□□□□ -1.03
SKA2-208ENST00000583927 ALG2Q9H553 416 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 DENND2DQ9H6A0 471 aaPredicted RBP8.64□□□□□ -1.03
SKA2-208ENST00000583927 MEPEQ9NQ76 525 aaPredicted RBP8.64□□□□□ -1.03
SKA2-208ENST00000583927 CBLN4Q9NTU7 201 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 TAS2R5Q9NYW4 299 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 ABCD2Q9UBJ2 740 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 RIMS3Q9UJD0 308 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 USP22Q9UPT9 525 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 SH3GLB1Q9Y371 365 aa8.64□□□□□ -1.03
SKA2-208ENST00000583927 IGHV1-18A0A0C4DH31 117 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 A0A1W2PR80 420 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 SLC35F4A4IF30 521 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 NPIPB13A6NJU9 1138 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 NPIPB4C9JG80 1138 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 E7EQL1 145 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 LRRN3E7EW58 273 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 M0R1B8 84 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 NME4O00746 187 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 PDE5AO76074 875 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 INHBBP09529 407 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 ADORA3P0DMS8 318 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 HLA-DOBP13765 273 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 CBR1P16152 277 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 DRD4P21917 467 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 LSP1P33241 339 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 ATP5J2P56134 94 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 TAS2R41P59536 307 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 UBE2NP61088 152 aaKnown RBP8.63□□□□□ -1.03
SKA2-208ENST00000583927 SF3A3Q12874 501 aaKnown RBP eCLIP8.63□□□□□ -1.03
SKA2-208ENST00000583927 CEACAM16Q2WEN9 425 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 HIKESHIQ53FT3 197 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 CBLL1Q75N03 491 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 SLC46A3Q7Z3Q1 461 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 IL17RDQ8NFM7 739 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 Q96MF0 132 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 SLC38A2Q96QD8 506 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 ELAC2Q9BQ52 826 aaKnown RBP8.63□□□□□ -1.03
SKA2-208ENST00000583927 BARX1Q9HBU1 254 aaPredicted RBP8.63□□□□□ -1.03
SKA2-208ENST00000583927 CRLF2Q9HC73 371 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 B3GAT2Q9NPZ5 323 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 A4GNTQ9UNA3 340 aa8.63□□□□□ -1.03
SKA2-208ENST00000583927 FN1P02751 2386 aaKnown RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 GMNCA6NCL1 334 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ZNF726A6NNF4 738 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 H7C417 338 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 CXCR6O00574 342 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 MGRN1O60291 552 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ENTPD5O75356 428 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 OR6A2O95222 327 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 CH25HO95992 272 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 HIST1H2ABP04908 130 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 CDH2P19022 906 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 CBLP22681 906 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 APOBEC3AP31941 199 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms