RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MYBPC1Q00872 1141 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KEAP1Q14145 624 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC17A1Q14916 467 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PDK3Q15120 406 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SF3B4Q15427 424 aaKnown RBP eCLIP14.57□□□□□ -0.082e-15■■■□□ 18.1
CDK5RAP3-228ENST00000583363 PGGHGQ32M88 737 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 C12orf73Q69YU5 71 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ABLIM2Q6H8Q1 611 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF585AQ6P3V2 769 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PLXDC2Q6UX71 529 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 FAM122BQ7Z309 247 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 UEVLDQ8IX04 471 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 FNDC9Q8TBE3 224 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ERMAPQ96PL5 475 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KATNB1Q9BVA0 655 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PRRG4Q9BZD6 226 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TXNIPQ9H3M7 391 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CALHM2Q9HA72 323 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KLHL13Q9P2N7 655 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PLEKHB1Q9UF11 243 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GMPPBQ9Y5P6 360 aa14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RP1L1Q8IWN7 2480 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SHANK1Q9Y566 2161 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 A0A1W2PRG6 482 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 NPIPB13A6NJU9 1138 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF716A6NP11 495 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 NPIPB4C9JG80 1138 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 AQP8O94778 261 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TGM6O95932 706 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 IGHMP01871 453 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TPOP07202 933 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 HOXD4P09016 255 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GABRA1P14867 456 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF43P17038 809 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GNLYP22749 145 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GRK5P34947 590 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PTGER4P35408 488 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RPS6KA3P51812 740 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC16A1P53985 500 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RASGEF1BQ0VAM2 473 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 C1DQ13901 141 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ACKR1Q16570 336 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF362Q5T0B9 420 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GPR139Q6DWJ6 353 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GTF2IRD2BQ6EKJ0 949 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 USP51Q70EK9 711 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CREB3L2Q70SY1 520 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC35D2Q76EJ3 337 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GPAT4Q86UL3 456 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GTF2IRD2Q86UP8 949 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CCDC71Q8IV32 467 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZIC4Q8N9L1 334 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 OR9K2Q8NGE7 335 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RNF128Q8TEB7 428 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TXNDC15Q96J42 360 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TSPAN32Q96QS1 320 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TEX12Q9BXU0 123 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TVP23BQ9NYZ1 205 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CLCF1Q9UBD9 225 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ING1Q9UK53 422 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ADAM18Q9Y3Q7 739 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PRRC2CQ9Y520 2896 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ALPK2Q86TB3 2170 aa14.56□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KIAA1549Q9HCM3 1950 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 IGKV3D-15A0A087WSY6 115 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CD8B2A6NJW9 211 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC22A20A6NK97 555 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KDM4EB2RXH2 506 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 DENRO43583 198 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TRAF3IP2O43734 574 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 WDR1O75083 606 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 AGFG2O95081 481 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CLIC3O95833 236 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PLGP00747 810 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 IFNGR1P15260 489 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ABOP16442 354 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RPL27P61353 136 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 EFNB1P98172 346 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 POU3F1Q03052 451 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RBPJQ06330 500 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 IL18R1Q13478 541 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RNPS1Q15287 305 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ACSF3Q4G176 576 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ARMC4Q5T2S8 1044 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF691Q5VV52 312 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 NSUN5P2Q63ZY6 315 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZGRF1Q86YA3 2104 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ST6GALNAC3Q8NDV1 305 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 WNT2BQ93097 391 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 Q96M85 177 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TRIB1Q96RU8 372 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 POLDIP3Q9BY77 421 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RNF122Q9H9V4 155 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GRHPRQ9UBQ7 328 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 MYO9AB2RTY4 2548 aa14.55□□□□□ -0.08
CDK5RAP3-228ENST00000583363 PRRG2O14669 202 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SURF4O15260 269 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SERPINI2O75830 405 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 BCL10O95999 233 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GNAO1P09471 354 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms