RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 NBPF5PQ86XG9 351 aaPredicted RBP3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 TGIF2LXQ8IUE1 241 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 Q8N9L7 120 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 MDS2Q8NDY4 140 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 OR4F15Q8NGB8 312 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 OR51G1Q8NGK1 321 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 DTX3LQ8TDB6 740 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 FAIM2Q9BWQ8 316 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 COX16Q9P0S2 106 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 SLC7A8Q9UHI5 535 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 SLC25A27O95847 323 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 TDGF1P13385 188 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 GYG1P46976 350 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 TPMTP51580 245 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 TDGF1P3P51864 188 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 RFX4Q33E94 735 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 TRIM40Q6P9F5 258 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 C19orf35Q6ZS72 473 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 H2BFWTQ7Z2G1 175 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 ZNF606Q8WXB4 792 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 IFT74Q96LB3 600 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 OR8B4Q96RC9 309 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 RANBP3Q9H6Z4 567 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 NIPAL2Q9H841 368 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 MRPL47Q9HD33 250 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 SPATA7Q9P0W8 599 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 SUN2Q9UH99 717 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 ASB3Q9Y575 518 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 MAP3K15Q6ZN16 1313 aa3.59□□□□□ -1.83
SMARCE1-219ENST00000583294 IGKV6D-21A0A0A0MT36 114 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 NKX2-6A6NCS4 301 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 TMX2-CTNND1H3BSU7 103 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 LAD1O00515 517 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 PES1O00541 588 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 SERPINA3P01011 423 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 HOXC4P09017 264 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 PNMA6AP0CW24 399 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 MX1P20591 662 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 CNR1P21554 472 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 ATP5C1P36542 298 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 FDFT1P37268 417 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 CDH4P55283 916 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 FZD2Q14332 565 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 GK3PQ14409 553 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 C6orf226Q5I0X4 101 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 Q6P435 159 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 KDM7AQ6ZMT4 941 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 LRRC74BQ6ZQY2 392 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 OR10G9Q8NGN4 311 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 OR1N2Q8NGR9 330 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 MED8Q96G25 268 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 HSFY1Q96LI6 401 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 SORT1Q99523 831 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 GNPTGQ9UJJ9 305 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
SMARCE1-219ENST00000583294 ERLIN2O94905 339 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 C1orf105O95561 183 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 CSF3P09919 207 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 GKN3PP0CG01 181 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 NCF2P19878 526 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 TCN1P20061 433 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 RORAP35398 523 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 HSD17B2P37059 387 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 NMUP48645 174 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 MSH6P52701 1360 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 CRISP3P54108 245 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 BST1Q10588 318 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 PPIL2Q13356 520 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 ZNF77Q15935 545 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 CTSL3PQ5NE16 218 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 AGBL2Q5U5Z8 902 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 C6orf120Q7Z4R8 191 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 PSTKQ8IV42 348 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 ZADH2Q8N4Q0 377 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 VN1R2Q8NFZ6 395 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 OR13C2Q8NGS9 318 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 OR2G3Q8NGZ4 309 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 OR2G2Q8NGZ5 317 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 MARCH1Q8TCQ1 289 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 MCOLN3Q8TDD5 553 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 SHC3Q92529 594 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 FBXO32Q969P5 355 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 NT5C3BQ969T7 300 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 RARRES2Q99969 163 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 TMEM59Q9BXS4 323 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 PLA2G2FQ9BZM2 168 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 SLCO1B3Q9NPD5 702 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 XCL2Q9UBD3 114 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 PCYOX1Q9UHG3 505 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 PEX16Q9Y5Y5 336 aa3.57□□□□□ -1.84
SMARCE1-219ENST00000583294 KANK1Q14678 1352 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 FAM240BA0A1B0GVZ2 78 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 A0A1W2PPV9 198 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 C11orf94C9JXX5 98 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 MGRN1O60291 552 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 IGHV2-5P01817 119 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 IGHDP01880 384 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 IRX3P78415 501 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms