RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	IRX1	P78414	480 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	IRF8	Q02556	426 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	RGS1	Q08116	209 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM187	Q14656	261 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ZIC1	Q15915	447 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	NDUFA9	Q16795	377 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	IFI44L	Q53G44	452 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC25A53	Q5H9E4	307 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TOR1AIP1	Q5JTV8	583 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF678	Q5SXM1	525 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	HIST2H2AA3	Q6FI13	130 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MED27	Q6P2C8	311 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TMIGD1	Q6UXZ0	262 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MBOAT1	Q6ZNC8	495 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	RGS9BP	Q6ZS82	235 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	FAM92B	Q6ZTR7	304 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	BTN2A1	Q7KYR7	527 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	VN1R4	Q7Z5H5	301 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	EID3	Q8N140	333 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	C4orf33	Q8N1A6	199 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	GBP7	Q8N8V2	638 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	LRTM2	Q8N967	370 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TTC29	Q8NA56	475 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MFSD9	Q8NBP5	474 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	OR1L3	Q8NH93	324 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	PIK3R3	Q92569	461 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	NEIL2	Q969S2	332 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	RERG	Q96A58	199 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM186	Q96B77	213 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MED8	Q96G25	268 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SMIM10	Q96HG1	83 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	CNDP1	Q96KN2	507 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	C4orf45	Q96LM5	186 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	CTRC	Q99895	268 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	OPRPN	Q99935	248 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SELENOS	Q9BQE4	189 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ATG10	Q9H0Y0	220 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	C1orf21	Q9H246	121 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	WDR54	Q9H977	334 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ACTR8	Q9H981	624 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	EML4	Q9HC35	981 aa	Known RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	FAM60A	Q9NP50	221 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MED4	Q9NPJ6	270 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ATAD3A	Q9NVI7	634 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	NMRK1	Q9NWW6	199 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SOHLH2	Q9NX45	425 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC39A1	Q9NY26	324 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM9	Q9P0T7	183 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	CACNG5	Q9UF02	275 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TBK1	Q9UHD2	729 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	NXT1	Q9UKK6	140 aa	Known RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	KLK13	Q9UKR3	277 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	RARRES3	Q9UL19	164 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SATB2	Q9UPW6	733 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MRPS28	Q9Y2Q9	187 aa	Known RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	PYGO1	Q9Y3Y4	419 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ANGPTL3	Q9Y5C1	460 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	DNAH14	Q0VDD8	3507 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	WDFY4	Q6ZS81	3184 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	THADA	Q6YHU6	1953 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	UQCRHL	A0A096LP55	91 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TRBV2	A0A0J9YWF9	115 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453		A0A1B0GU03	582 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	C2orf92	A0A1B0GVN3	265 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM120B	A0PK00	339 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	LRIT2	A6NDA9	550 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TRABD2B	A6NFA1	517 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SERINC4	A6NH21	518 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	NCF1B	A6NI72	391 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SMIM23	A6NLE4	172 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	VSTM2B	A6NLU5	285 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	NCF1C	A8MVU1	366 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453		H0YGG7	62 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	GOLGA8R	I6L899	631 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	OR7A17	O14581	309 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	HAT1	O14929	419 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF749	O43361	778 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	RAD1	O60671	282 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	GALR3	O60755	368 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SNN	O75324	88 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CRCP	O75575	148 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SCRG1	O75711	98 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	KRT33A	O76009	404 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	STK17B	O94768	372 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TNFSF15	O95150	251 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TBX6	O95947	436 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	IGHE	P01854	428 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	KRT6A	P02538	564 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	RAF1	P04049	648 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	KRT6B	P04259	564 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	UQCRH	P07919	91 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	IFI6	P09912	130 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	NEFH	P12036	1026 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CCL4	P13236	92 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	NCF1	P14598	390 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	PVR	P15151	417 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	PSMB5	P28074	263 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SRD5A2	P31213	254 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ETV5	P41161	510 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	KRT6C	P48668	564 aa		2.69	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms