RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 UEVLDQ8IX04 471 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 MBD3L2Q8NHZ7 208 aaPredicted RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 TEX47Q8TBZ9 253 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 RDH12Q96NR8 316 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 ZNF385AQ96PM9 386 aaKnown RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 IFT27Q9BW83 186 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 VCXQ9H320 206 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 VCX3BQ9H321 246 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 TXNIPQ9H3M7 391 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 BCO1Q9HAY6 547 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 NRIP3Q9NQ35 241 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 SMPD3Q9NY59 655 aaPredicted RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 KLHL9Q9P2J3 617 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 OSGIN2Q9Y236 505 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 IER3IP1Q9Y5U9 82 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 FLVCR1Q9Y5Y0 555 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 A0A1W2PRG6 482 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 NPIPB13A6NJU9 1138 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ZNF724A8MTY0 619 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 NPIPB4C9JG80 1138 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ARPC3O15145 178 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 TXNDC12O95881 172 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 IGHMP01871 453 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 YES1P07947 543 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 STSP08842 583 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 FCGR2AP12318 317 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 APEHP13798 732 aaKnown RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 CDH2P19022 906 aaPredicted RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 TIMP3P35625 211 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 CA7P43166 264 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 RPL27P61353 136 aaKnown RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 ADARB1P78563 741 aaKnown RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 POU3F1Q03052 451 aaPredicted RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 RUNX1T1Q06455 604 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 PMPCAQ10713 525 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 TOP3AQ13472 1001 aaPredicted RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 GUSBP1Q15486 140 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 TAF11Q15544 211 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ACKR1Q16570 336 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 PGGHGQ32M88 737 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ZNF362Q5T0B9 420 aaPredicted RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 ARMC4Q5T2S8 1044 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 EEF1A1P5Q5VTE0 462 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 GTF2IRD2BQ6EKJ0 949 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 SLC27A4Q6P1M0 643 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 IZUMO2Q6UXV1 221 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 B3GNT6Q6ZMB0 384 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 GTF2IRD2Q86UP8 949 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 TUSC5Q8IXB3 177 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 LNX2Q8N448 690 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 MARVELD2Q8N4S9 558 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 GALNT11Q8NCW6 608 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 OR2T33Q8NG76 320 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ZNF519Q8TB69 540 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ASB10Q8WXI3 467 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 RASD2Q96D21 266 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 HRASLS5Q96KN8 279 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 Q96M85 177 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ZNF570Q96NI8 536 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ERMAPQ96PL5 475 aaPredicted RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 TSPAN32Q96QS1 320 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 TM9SF2Q99805 663 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 TTYH2Q9BSA4 534 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 EMC6Q9BV81 110 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 POLDIP3Q9BY77 421 aaKnown RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 NDEL1Q9GZM8 345 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 SLC25A19Q9HC21 320 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 FAM118AQ9NWS6 357 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 MED29Q9NX70 200 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ENOPH1Q9UHY7 261 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 SH3BGRL2Q9UJC5 107 aa8.47□□□□□ -1.05
RFFL-210ENST00000582308 ZNF346Q9UL40 294 aaKnown RBP8.47□□□□□ -1.05
RFFL-210ENST00000582308 TRGV8A0A0C4DH27 118 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 TEX13CA0A0J9YWL9 993 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 LOC100130705A0A1B0GUX0 176 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 SLC35F4A4IF30 521 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 E9PLN8 166 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 GPR171O14626 319 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 IMPA2O14732 288 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 SLC16A6O15403 523 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 IDH3BO43837 385 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 SS18L1O75177 396 aaPredicted RBP8.46□□□□□ -1.06
RFFL-210ENST00000582308 ZNF432O94892 652 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 BCL10O95999 233 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 GNLYP22749 145 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 EDNRAP25101 427 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 AGTR1P30556 359 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 SDHAP31040 664 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 CEACAM8P31997 349 aaPredicted RBP8.46□□□□□ -1.06
RFFL-210ENST00000582308 GRK5P34947 590 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 KIR2DL2P43627 348 aaPredicted RBP8.46□□□□□ -1.06
RFFL-210ENST00000582308 UQCRFS1P47985 274 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 DAP3P51398 398 aaKnown RBP8.46□□□□□ -1.06
RFFL-210ENST00000582308 RPS6KA3P51812 740 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 SMSP52788 366 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 BIDP55957 195 aa8.46□□□□□ -1.06
RFFL-210ENST00000582308 CLDN17P56750 224 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms