RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 A6NDX4 124 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 H0Y8G0 127 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 C1orf105O95561 183 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC2A3P11169 496 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 MGMTP16455 207 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 CASP14P31944 242 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 FDFT1P37268 417 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 RPS10P46783 165 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 SULT1E1P49888 294 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 ATP5IP56385 69 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 KIAA0087Q14695 138 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 TRIM40Q6P9F5 258 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 CNIH2Q6PI25 160 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 EGFL6Q8IUX8 553 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 PSTKQ8IV42 348 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 MKXQ8IYA7 352 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 Q8N9W7 124 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 OR2L3Q8NG85 312 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 AKR7LQ8NHP1 331 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 TUBGCP3Q96CW5 907 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 OR2M2Q96R28 347 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 OR8B4Q96RC9 309 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 SORT1Q99523 831 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 MFFQ9GZY8 342 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 DEFB127Q9H1M4 99 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 CLMPQ9H6B4 373 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 RANBP3Q9H6Z4 567 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 MRPL47Q9HD33 250 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 GLRX2Q9NS18 164 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 KLHL28Q9NXS3 571 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 RABL2BQ9UNT1 228 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 TP53TG5Q9Y2B4 290 aa3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 RRP15Q9Y3B9 282 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-205ENST00000581383 COL16A1Q07092 1604 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 PPIAL4EA0A075B759 164 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 UBXN8O00124 270 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 PSTPIP1O43586 416 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 ERLIN2O94905 339 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 ALDOBP05062 364 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 PPIAL4FP0DN26 164 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 HPGDP15428 266 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 TCN1P20061 433 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 KITLGP21583 273 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 MDKP21741 143 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 HNRNPH3P31942 346 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 ATP5C1P36542 298 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 HSD17B2P37059 387 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 MPPED2Q15777 294 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF658BQ4V348 819 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 LRRC10Q5BKY1 277 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 FRMPD2BQ6IN97 320 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 LCN12Q6JVE5 192 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 IGFL2Q6UWQ7 119 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF621Q6ZSS3 439 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 COX15Q7KZN9 410 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 TAS2R42Q7RTR8 314 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 CNPY4Q8N129 248 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 HSFY1Q96LI6 401 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 MYCBPQ99417 103 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 TCHPQ9BT92 498 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 TMEM59Q9BXS4 323 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF331Q9NQX6 463 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC25A37Q9NYZ2 338 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 SPATA7Q9P0W8 599 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 IKZF2Q9UKS7 526 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 TRAPPC4Q9Y296 219 aa3.09□□□□□ -1.91
SMCHD1-205ENST00000581383 PDS5BQ9NTI5 1447 aa3.09□□□□□ -1.92
SMCHD1-205ENST00000581383 CDC42BPBQ9Y5S2 1711 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 CCL21O00585 134 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 TMEM50AO95807 157 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 IGHV2-5P01817 119 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 FGF1P05230 155 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 UQCRFS1P1P0C7P4 283 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 CRISP2P16562 243 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 RORAP35398 523 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 VHLP40337 213 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 NPBWR2P48146 333 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 LHX2P50458 406 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 BST2Q10589 180 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 CAPRIN1Q14444 709 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 SSX2Q16385 188 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 CDH26Q8IXH8 852 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 PUSL1Q8N0Z8 303 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 ZADH2Q8N4Q0 377 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 CCDC54Q8NEL0 328 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 OR4F15Q8NGB8 312 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 OR2G2Q8NGZ5 317 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 TMEM158Q8WZ71 300 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 MED8Q96G25 268 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF799Q96GE5 643 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 TPD52L3Q96J77 140 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 RARRES2Q99969 163 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 PKIBQ9C010 78 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 EXD2Q9NVH0 621 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 DEC1Q9P2X7 70 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 PISDQ9UG56 409 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 PRG3Q9Y2Y8 225 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 HEBP2Q9Y5Z4 205 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 CDHR2Q9BYE9 1310 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms