RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 APOBEC3AP31941 199 aaPredicted RBP17.6■□□□□ 0.41
SMG8-204ENST00000580498 NUDT6P53370 316 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 DSCR9P59020 149 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 CEACAM16Q2WEN9 425 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 LRRC23Q53EV4 343 aaPredicted RBP17.6■□□□□ 0.41
SMG8-204ENST00000580498 CARD17Q5XLA6 110 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 HDDC2Q7Z4H3 204 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 CARM1Q86X55 608 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 BCL2L2Q92843 193 aaPredicted RBP17.6■□□□□ 0.41
SMG8-204ENST00000580498 OR2M2Q96R28 347 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 CACNG6Q9BXT2 260 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 ULBP2Q9BZM5 246 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 NSRP1Q9H0G5 558 aaKnown RBP17.6■□□□□ 0.41
SMG8-204ENST00000580498 PCDHAC1Q9H158 963 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 USP22Q9UPT9 525 aa17.6■□□□□ 0.41
SMG8-204ENST00000580498 MS4A18H0YCH9 400 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 PLPP3O14495 311 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 RNF13O43567 381 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 TPST2O60704 377 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 ARF1P84077 181 aaKnown RBP17.59■□□□□ 0.41
SMG8-204ENST00000580498 PPP2R2BQ00005 443 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 LTBQ06643 244 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 SPOCK1Q08629 439 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 MS4A18Q3C1V0 323 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 DEF8Q6ZN54 512 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 NANOGNBQ7Z5D8 188 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 CALHM3Q86XJ0 350 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 FAM169BQ8N8A8 192 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 IL17RDQ8NFM7 739 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 OR4F15Q8NGB8 312 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 C10orf82Q8WW14 230 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 MOGAT1Q96PD6 335 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 RHNO1Q9BSD3 238 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 ZNF229Q9UJW7 825 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 MOKQ9UQ07 419 aa17.59■□□□□ 0.41
SMG8-204ENST00000580498 ELOVL7A1L3X0 281 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 SLC35F4A4IF30 521 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 C11orf98E9PRG8 122 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 ATP6V1G2-DDX39BF2Z307 99 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 FXYD1O00168 92 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 KPNA4O00629 521 aaPredicted RBP17.58■□□□□ 0.4
SMG8-204ENST00000580498 GSTA4O15217 222 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 CH25HO95992 272 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 TP53P04637 393 aaPredicted RBP17.58■□□□□ 0.4
SMG8-204ENST00000580498 PTNP21246 168 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 ARR3P36575 388 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 RBM34P42696 430 aaKnown RBP17.58■□□□□ 0.4
SMG8-204ENST00000580498 CSNK1A1P48729 337 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 GZMMP51124 257 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 SNRPD2P62316 118 aaKnown RBP17.58■□□□□ 0.4
SMG8-204ENST00000580498 SLC25A3Q00325 362 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 LGALS3BPQ08380 585 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 CGB2Q6NT52 195 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 CLEC2AQ6UVW9 174 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 LINC00114Q6XXX2 140 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 C20orf196Q8IYI0 205 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 HOPXQ9BPY8 73 aaPredicted RBP17.58■□□□□ 0.4
SMG8-204ENST00000580498 RSPO3Q9BXY4 272 aaPredicted RBP17.58■□□□□ 0.4
SMG8-204ENST00000580498 EFCAB1Q9HAE3 211 aa17.58■□□□□ 0.4
SMG8-204ENST00000580498 PLCE1Q9P212 2302 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 OR5F1O95221 314 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 THRBP10828 461 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 TNK1Q13470 666 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 ZNF74Q16587 644 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 MICU2Q8IYU8 434 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 TMEM123Q8N131 208 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 RCN3Q96D15 328 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 TPD52L3Q96J77 140 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 WFDC6Q9BQY6 131 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 EMC6Q9BV81 110 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 ARMCX1Q9P291 453 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 STX18Q9P2W9 335 aaKnown RBP17.57■□□□□ 0.4
SMG8-204ENST00000580498 FBXL3Q9UKT7 428 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 FKBP7Q9Y680 259 aa17.57■□□□□ 0.4
SMG8-204ENST00000580498 SETD2Q9BYW2 2564 aaPredicted RBP17.56■□□□□ 0.4
SMG8-204ENST00000580498 IGHV1-18A0A0C4DH31 117 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 A0A1W2PRG6 482 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 HTR3EA5X5Y0 456 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 MCIDASD6RGH6 385 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 CD8AP01732 235 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 IGHV4-39P01824 125 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 ERCC1P07992 297 aaPredicted RBP17.56■□□□□ 0.4
SMG8-204ENST00000580498 CSF3P09919 207 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 CBR1P16152 277 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 LSP1P33241 339 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 KDELR2P33947 212 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 BIDP55957 195 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 ZP4Q12836 540 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 CAMK2DQ13557 499 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 CYBRD1Q53TN4 286 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 SLC35D2Q76EJ3 337 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 LSRQ86X29 649 aaPredicted RBP17.56■□□□□ 0.4
SMG8-204ENST00000580498 RBM45Q8IUH3 476 aaKnown RBP17.56■□□□□ 0.4
SMG8-204ENST00000580498 CMTM5Q96DZ9 223 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 ZNF583Q96ND8 569 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 SMR3AQ99954 134 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 MED29Q9NX70 200 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 CRNNQ9UBG3 495 aaPredicted RBP17.56■□□□□ 0.4
SMG8-204ENST00000580498 MED31Q9Y3C7 131 aa17.56■□□□□ 0.4
SMG8-204ENST00000580498 SPEF1Q9Y4P9 236 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms