RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 NPAP1Q9NZP6 1156 aa21.79■■□□□ 1.08
CDC42EP4-205ENST00000580315 GMPR2Q9P2T1 348 aaKnown RBP21.79■■□□□ 1.08
CDC42EP4-205ENST00000580315 ABCD2Q9UBJ2 740 aa21.79■■□□□ 1.08
CDC42EP4-205ENST00000580315 RIMS3Q9UJD0 308 aa21.79■■□□□ 1.08
CDC42EP4-205ENST00000580315 ATRQ13535 2644 aa21.79■■□□□ 1.08
CDC42EP4-205ENST00000580315 RAI1Q7Z5J4 1906 aaPredicted RBP21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 A0A1W2PR80 420 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 PLPP3O14495 311 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 UPK3AO75631 287 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 ZNF432O94892 652 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 ZNF682O95780 498 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 WNT11O96014 354 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 HPRP00739 348 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 HIST1H2ABP04908 130 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 SH3BGRP55822 239 aaPredicted RBP21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 PRPS1P60891 318 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 PPP2R2BQ00005 443 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 LGALS3BPQ08380 585 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 PIN1Q13526 163 aaPredicted RBP21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 HIST3H2AQ7L7L0 130 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 PXKQ7Z7A4 578 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 ANKK1Q8NFD2 765 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 HIST1H2ACQ93077 130 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 RADILQ96JH8 1075 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 PRSS27Q9BQR3 290 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 ZNF229Q9UJW7 825 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 MGAT4BQ9UQ53 548 aa21.78■■□□□ 1.08
CDC42EP4-205ENST00000580315 FBN1P35555 2871 aaKnown RBP21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 ADORA3P0DMS8 318 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 UMPSP11172 480 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 PTAFRP25105 342 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 ZNF83P51522 516 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 WDR31Q8NA23 367 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 FBXW5Q969U6 566 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 FAM162AQ96A26 154 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 BOD1Q96IK1 185 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 HS6ST2Q96MM7 605 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 OR2M2Q96R28 347 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 OBP2BQ9NPH6 170 aa21.77■■□□□ 1.08
CDC42EP4-205ENST00000580315 ZNF726A6NNF4 738 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 ABCD4O14678 606 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 GMNNO75496 209 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 IFNW1P05000 195 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 HLA-DOBP13765 273 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 PAX1P15863 534 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 ROR2Q01974 943 aaKnown RBP21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 ZNF672Q499Z4 452 aaPredicted RBP21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 NKAIN4Q8IVV8 208 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 OR1K1Q8NGR3 316 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 TMEM171Q8WVE6 324 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 TMEM239Q8WW34 195 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 GEMIN6Q8WXD5 167 aaKnown RBP21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 ADA2Q9NZK5 511 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 TAGLN3Q9UI15 199 aa21.76■■□□□ 1.07
CDC42EP4-205ENST00000580315 RPL36A-HNRNPH2H7BZ11 118 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 M0R1B8 84 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 TMCC2O75069 709 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 SERPINI2O75830 405 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 SERPINA1P01009 418 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 MT-ND1P03886 318 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 PAX7P23759 505 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 ST3GAL3Q11203 375 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 HIKESHIQ53FT3 197 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 IFI44LQ53G44 452 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 FKBP9P1Q75LS8 142 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 CBLL1Q75N03 491 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 VTCN1Q7Z7D3 282 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 TMEM123Q8N131 208 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 KBTBD8Q8NFY9 601 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 TMEM255BQ8WV15 326 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 PRRC1Q96M27 445 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 B3GAT2Q9NPZ5 323 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 ZNF701Q9NV72 531 aaPredicted RBP21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 USF3Q68DE3 2245 aa21.75■■□□□ 1.07
CDC42EP4-205ENST00000580315 C11orf98E9PRG8 122 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 RNF13O43567 381 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 IGF2P01344 180 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 CD40P25942 277 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 UBE2NP61088 152 aaKnown RBP21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 ZP4Q12836 540 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 TBRG1Q3YBR2 411 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 CARD17Q5XLA6 110 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 ANKRD16Q6P6B7 361 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 LINGO2Q7L985 606 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 NANOGNBQ7Z5D8 188 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 DEPDC4Q8N2C3 294 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 PIAS4Q8N2W9 510 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 ANKS4BQ8N8V4 417 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 LILRB1Q8NHL6 650 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 LRR1Q96L50 414 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 EMC6Q9BV81 110 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 C1QTNF6Q9BXI9 259 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 CXorf56Q9H5V9 222 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 GPR35Q9HC97 309 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 MEPEQ9NQ76 525 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 MED29Q9NX70 200 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 RPS6KA6Q9UK32 745 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 ADAM21Q9UKJ8 722 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 MED31Q9Y3C7 131 aa21.74■■□□□ 1.07
CDC42EP4-205ENST00000580315 SLC35F4A4IF30 521 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms