RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 AGTR1P30556 359 aa17.02■□□□□ 0.32
LIMD2-209ENST00000580222 CDH12P55289 794 aa17.02■□□□□ 0.32
LIMD2-209ENST00000580222 PIN1Q13526 163 aaPredicted RBP17.02■□□□□ 0.32
LIMD2-209ENST00000580222 SWT1Q5T5J6 900 aaKnown RBP17.02■□□□□ 0.32
LIMD2-209ENST00000580222 NUFIP2Q7Z417 695 aaKnown RBP17.02■□□□□ 0.32
LIMD2-209ENST00000580222 TSPYL5Q86VY4 417 aaPredicted RBP17.02■□□□□ 0.32
LIMD2-209ENST00000580222 ADGRG3Q86Y34 549 aa17.02■□□□□ 0.32
LIMD2-209ENST00000580222 ADGRG5Q8IZF4 528 aa17.02■□□□□ 0.32
LIMD2-209ENST00000580222 C7orf34Q96L11 122 aa17.02■□□□□ 0.32
LIMD2-209ENST00000580222 KLHL15Q96M94 604 aa17.02■□□□□ 0.32
LIMD2-209ENST00000580222 ZNF300Q96RE9 604 aaPredicted RBP17.02■□□□□ 0.32
LIMD2-209ENST00000580222 TCRBV3S1A0A5B6 114 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 EFNA2O43921 213 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 EGR1P18146 543 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 SLC7A1P30825 629 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 ST3GAL3Q11203 375 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 SYT14P1Q58G82 188 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 SFRP5Q5T4F7 317 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 LSRQ86X29 649 aaPredicted RBP17.01■□□□□ 0.31
LIMD2-209ENST00000580222 OFCC1Q8IZS5 231 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 C10orf105Q8TEF2 133 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 CANT1Q8WVQ1 401 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 HSD17B8Q92506 261 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 DDIT4LQ96D03 193 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 FNDC11Q9BVV2 318 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 NDUFAF4Q9P032 175 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 RHCGQ9UBD6 479 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 RIMS3Q9UJD0 308 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 A4GNTQ9UNA3 340 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 FREM1Q5H8C1 2179 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 MALRD1Q5VYJ5 2156 aa17.01■□□□□ 0.31
LIMD2-209ENST00000580222 LY6HO94772 140 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 DIRAS1O95057 198 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 MT-ND1P03886 318 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 RAP2AP10114 183 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 SLC25A16P16260 332 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 RHCEP18577 417 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 SHC1P29353 583 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 MAP2K6P52564 334 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 DSCR9P59020 149 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 CCNIQ14094 377 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 TMEM176BQ3YBM2 270 aaPredicted RBP17■□□□□ 0.31
LIMD2-209ENST00000580222 PDSS1Q5T2R2 415 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 LIPNQ5VXI9 398 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 TFAP2EQ6VUC0 442 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 TSEN54Q7Z6J9 526 aaKnown RBP17■□□□□ 0.31
LIMD2-209ENST00000580222 STK32CQ86UX6 486 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 MEX3DQ86XN8 651 aaKnown RBP17■□□□□ 0.31
LIMD2-209ENST00000580222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17■□□□□ 0.31
LIMD2-209ENST00000580222 SLC38A4Q969I6 547 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 MSI2Q96DH6 328 aaKnown RBP17■□□□□ 0.31
LIMD2-209ENST00000580222 OR5B2Q96R09 309 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 HDHD5Q9BXW7 423 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 OR11A1Q9GZK7 315 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 IL1RAPQ9NPH3 570 aa17■□□□□ 0.31
LIMD2-209ENST00000580222 A0A087WUJ7 227 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 ANKRD65E5RJM6 399 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 TNFSF11O14788 317 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 ZNF208O43345 1280 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 THY1P04216 161 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 THRBP10828 461 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 HOXB6P17509 224 aaKnown RBP16.99■□□□□ 0.31
LIMD2-209ENST00000580222 USF1P22415 310 aaPredicted RBP16.99■□□□□ 0.31
LIMD2-209ENST00000580222 FKBP2P26885 142 aaKnown RBP16.99■□□□□ 0.31
LIMD2-209ENST00000580222 MAGEA2P43356 314 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 CDH11P55287 796 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 LSM11P83369 360 aaKnown RBP eCLIP16.99■□□□□ 0.31
LIMD2-209ENST00000580222 SPIBQ01892 262 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 KPNB1Q14974 876 aaKnown RBP16.99■□□□□ 0.31
LIMD2-209ENST00000580222 ESPNLQ6ZVH7 1005 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 OR2V1Q8NHB1 315 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 DNAJA3Q96EY1 480 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 MPP4Q96JB8 637 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 ADAD1Q96M93 576 aaKnown RBP16.99■□□□□ 0.31
LIMD2-209ENST00000580222 ZNF347Q96SE7 839 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 FANCFQ9NPI8 374 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 NPAP1Q9NZP6 1156 aa16.99■□□□□ 0.31
LIMD2-209ENST00000580222 A0A0J9YW62 118 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 LOC100289279A0A1B0GTE1 492 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 A0A1W2PNR3 127 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 ZC3H12DA2A288 527 aaKnown RBP16.98■□□□□ 0.31
LIMD2-209ENST00000580222 A8MVM7 634 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 E7EQL1 145 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 FFAR1O14842 300 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 LYPD3O95274 346 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 ADAP00813 363 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 IL32P24001 234 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 TRAM2Q15035 370 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 FGD3Q5JSP0 725 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 HBMQ6B0K9 141 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 TTC33Q6PID6 262 aaPredicted RBP16.98■□□□□ 0.31
LIMD2-209ENST00000580222 PIWIL3Q7Z3Z3 882 aaKnown RBP16.98■□□□□ 0.31
LIMD2-209ENST00000580222 NKAIN4Q8IVV8 208 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 STK35Q8TDR2 534 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 FAM168AQ92567 244 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 YY1AP1Q9H869 796 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 COQ10BQ9H8M1 238 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 NGBQ9NPG2 151 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 KCNS2Q9ULS6 477 aa16.98■□□□□ 0.31
LIMD2-209ENST00000580222 ZNF814B7Z6K7 855 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms